Transcript | Ll_transcript_101118 |
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CDS coordinates | 169-3720 (+) |
Peptide sequence | MSFPVTSGASAAMPASGHRGITLSNTIHSEVASCLPLPSLPLFCGASDQDLRLGDYRSMMLNRAEVLAQSSKIAELLEHTDVSYLKLRDDANGVPYTYVEPSELHGEVLRCNPEAFEYSITGPIKEQISGSVLPEKTLSESSFPLTSQTQNDYNATSSCQLDNFSTNDIVTLSSKKSKLKKKGGNGVSIAPDAAELQDAHIGRFLEILEDLCSKAECNNDDRDEEEWLSVPLSDLRMLVNEIMSIREKKLLHFVPVELLVRLLKVLDHQIHRAEGLSIEDLDNSDSDVVSSILVALESIHAALAVMAYTEMPKQLYNEEIIERILEFSKRQIMDVMCACDPSFRALHRPSENTAFEGDDYEEVDAEFGSATKKRRTSKTLKLRKSTSSRAFTAENTILQKLCTVVGLLKDLLLIERLSDSCILQLVKTSFTTFLVENIQLLQLKSIGLLCAIFYLYTQHRTYVIDEMLQLLLKLPNSKRTLRAYHLREEEQRQIQMVTALLIQLIHCSANLPDALRQASSGNAVLEVSVDGSYPTKCHEALTDACCLFWSRVLQRFASVKTHDASELKSIMENLVTDLLATLNLPEYPASVPILEVLCVLLLQNAGPKSKDVSARCMAIDILGTIAARLKRDSLICSQEKFWILQDLLSQDTATQNYPKDTCCVCLGGRVENLFMCHGCQRLFHANCLGIKEHEVSSRNWYCQICICSKQLLVLRSYCNSQCKDEVTKNCEVAKVDSEVSKHEIVQQLLLNFLQDITSPDDLHVFICWFYLCLWCKDDSNCQQKSKHYLARMKSRIIVRNSATVSSMLTRDSIKKITLALGQNSSFCRGFDKILHVLLASLRENSPIIRAKALRAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHPDVGFKYFEKIAERIKDTGLSVRKRAIKIIRDMCSSNANFSGFTRACTEIIARVSDDESSIQDLVCKTFYEFWFEEPSASQARVFGDGSTVPLEVAKKTEQIVEMLRRMPNNQLLVTVIKRNLSLDFLPQSAKAAGLNPVSLATVRKRCELMCKCLLEKILQVEEMSSGEVEVHALPYVLVLHAFCLVDPTLCAPASNPSQFVVTLQPYLKTQVDNRMVAQLLESIIFIIDAVVPLLRKLPPSTVDELEQDLKQMIVRRSFLTVVHACIKYSRFPTIIFPC* |
ORF Type | complete |
Blastp | Sister chromatid cohesion protein SCC2 from Arabidopsis with 61.53% of identity |
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Blastx | Sister chromatid cohesion protein SCC2 from Arabidopsis with 61.7% of identity |
Eggnog | Nipped-B homolog (Drosophila)(ENOG410XP32) |
Kegg | Link to kegg annotations (AT5G15540) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442738.1) |
Pfam | HEAT repeat associated with sister chromatid cohesion (PF12765.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer