Protein coding transcript 19278

• Transcript: Ll_transcript_418887
• CDS coordinates: 107-2200 (+)
• Peptide sequence: MKRSIDDVTNTSASKPVFLTKAQREELALQRRQQQIADQKRRHEDILSTTDPKPSSSDRRERERDRDRDRDRDRDRDRDRDRDRERERERERERERDRARDRAREDERRNRMEKLAEREREKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNVLYQNPHEAQPLFGRGFRAGMDRREQKKLAAKNEKEMREQMRKKDGIEEKPEEADAQRRKEAAADLYDTFDMRVDRHWSEKKLDEMTERDWRIFREDYNISYKGSRIPRPMRSWIESKLSLELLKAVDKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISKLPPMSEEIEAEGPYAVVMAPTRELAQQIEDETVKFAQYLGFKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYCVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMVKESEKFHKLQRLLDELNDKTAIVFVNTKKNADMVAKNLDKDGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLHDTDVFYDLKQMLTQSNSPVPPELARHEASKFKPGSIPDRPPRRNDTVFAH*
• ORF Type: complete

Annotations of Ll_transcript_418887

• Blastp: DEAD-box ATP-dependent RNA helicase 21 from Arabidopsis with 87.71% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 21 from Arabidopsis with 88.75% of identity
• Eggnog: ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1 5'-splice site duplex to permit an effective competition for the 5'-splice site by the U6 snRNA, resulting in the switch between U1 and U6 at the 5'-splice site. May also act to unwind the U4 U6 base-pairing interaction in the U4 U6 U5 snRNP, facilitating the first covalent step of splicing(ENOG410XNVG)
• Kegg: Link to kegg annotations (AT2G33730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463889.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;