Transcript | Ll_transcript_21360 |
---|---|
CDS coordinates | 612-2876 (+) |
Peptide sequence | MEAYSSGEEIVVKARKPYTITKQRERWTEEEHNRFLQALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEALVKGSSIGQALDIDIPPPRPKRKPSNPYPRKTNVGAPTYQGGERDEKLIPVESSHVKQTLDFEKVPLLEKYNDGKRQTHGKDNKDENCSKVFPVLQEAPCSSSSGNKSSISMSAPLRNSCALREIIYSVKEAISQDETNESLVTIEPENRKLEVDDGKQTNGTIKESQLENCDASQVKLVQCEKTDGLNCTLTIDGMQGNQSYPKHVTVHVVDGNLGTSTKNPSLDMLFRDSMFQPIGKVNGQPNLFTNSTASNISENQNNTAPSSIHHPYFPYPPFAQHNRDDCQPFLHLSTTFSSLTVSTLLQNPAAHAAASLPATFCPYENAETSANAPACSQESFLSRQSGSPPNVEAIAAATVAAATAWWAAHGLLPVCAPLYTAFVCPTASMTAVPSMNIDEATAPNPELEESTLQNPPLQHQILDPEHSEAQQGQHSASKPLTVISSDSKENGDGSLNTSLKATTTDHEMDTTISENFDSDKTKIRKQVDCSSCGSNTTSSSDVETDALEKNGKGNEQPEAPEPDANHLITESSNHRSRSIVNLTDPWKEVSEEGRMAFRALFSREVLPQSFSQHDLKNKDHQMDNIKDNKQNVDNKYEDLNSKEWCSDCEGMQKNLPFLENEERLLTVGLGQEKLKTRRTGFIPYKRCSVEAKENNVGTSNIQAEDKDSKRIRLEGEASI* |
ORF Type | complete |
Blastp | Protein CCA1 from Arabidopsis with 38.47% of identity |
---|---|
Blastx | Protein LHY from Arabidopsis with 62.64% of identity |
Eggnog | Transcription factor(COG5269) |
Kegg | Link to kegg annotations (AT2G46830) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461318.1) |
Pfam | Myb-like DNA-binding domain (PF00249.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer