Transcript | Ll_transcript_432225 |
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CDS coordinates | 1-777 (+) |
Peptide sequence | HITINNCNNLQLSEITHINSPKGHITINNCKKIKICDLNITAPEDSPNTDGIDIIESNDILIQNCTIATGDDCIAMNKGTSNINITGVTCGPGHGISVGSLGKNGDYATVENVHVNNCSFYGTTNGVRIKTWPEANGYVRNVTFNQIRFYNSKNPIIITENYKDLEEGMGLEINGVTYKDVSGTSANSVAINLGCNSSIGCNNIIMDSVNITSTSPNNKVTASCTNVKGEETNVSPKVSCLIEKPPSKGSNKRIQYWI* |
ORF Type | 5prime_partial |
Blastp | Probable polygalacturonase At3g15720 from Arabidopsis with 46.8% of identity |
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Blastx | Probable polygalacturonase At3g15720 from Arabidopsis with 46.8% of identity |
Eggnog | Glycoside hydrolase family 28(COG5434) |
Kegg | Link to kegg annotations (AT3G15720) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019418602.1) |
Pfam | Glycosyl hydrolases family 28 (PF00295.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer