Transcript | Ll_transcript_20094 |
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CDS coordinates | 960-2129 (+) |
Peptide sequence | MFPVVELLQLIEAFEKPRPMCLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQGASSFLPVMALAPQEKERVVDMAAAPGGKTTYIAALMKNTGIIYANEIKVSRLKSLTANLHRMGVTNTVVCNYDAKELPKVLGQNTVDRILLDAPCSGTGVISKDESVKTSKDLEDIQKCARLQKELILAAIDMVDANSKSGGYIVYSTCSIMVAENEAVIDYALKKRDVKLVPCGLDFGRPGFTKFREQRFHPTLEKTRRFYPHVHNMDGFFVAKLKKMSSSSKPSATSEPLEKEEEGIELVKEEKASNGRKENGKDSPESKSKKEKKKNFAPKQSNDIKENGEESSESKSKKDKKRKFPPKPSNDIKEN |
ORF Type | 3prime_partial |
Blastp | Probable 28S rRNA (cytosine-C(5))-methyltransferase from Mus with 62.84% of identity |
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Blastx | Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase from Homo with 57.61% of identity |
Eggnog | nOP2 Sun(COG0144) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426277.1) |
Pfam | N-terminal domain of 16S rRNA methyltransferase RsmF (PF17125.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer