ta-siRNA 196 details

ID196
SequenceATCTAACGGACCAAATGAGTGATT 

Targets of siRNA 196

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_63402; 46 71 AATTTCACTCATTTGGTCCGTTAGAT BLAST
Ll_transcript_80551; 176 201 AATTCCACTCATTTGGTCCGTTAGAT BLAST
Ll_transcript_80556; 182 207 AATTCCACTCATTTGGTCCGTTAGAT BLAST
Ll_transcript_63423; 1501 1526 AATTTCACTCATTTGGTCCGTTAGAT BLAST
Ll_transcript_182677; 163 186 AATCACCCATTTGGTCCGTTAGAT BLAST
Ll_transcript_182674; 163 186 AATCACCCATTTGGTCCGTTAGAT BLAST
Ll_transcript_260146; 798 823 AATTTCACTCGTTTGGTCCGTTAGAT BLAST
Ll_transcript_69627; 168 191 TTTCATTCATTTGGTCCGTTAGAT BLAST
Ll_transcript_63400; 17 42 AATTTCACCCATTTGGTCCGTTAGAT BLAST
Ll_transcript_21013; 9 34 AATTTTACCCATTTGGTCCGTTAGAT BLAST
Ll_transcript_88816; 7374 7399 AATTTTACCCATTTGGTCCGTTAGAT BLAST
Ll_transcript_88819; 7455 7480 AATTTTACCCATTTGGTCCGTTAGAT BLAST
Ll_transcript_167689; 1 19 CTTATTTGGTCCGTTAGAT BLAST
Ll_transcript_68314; 87 110 AATCACTCATTTGGTCCGTTATAT BLAST
Ll_transcript_182650; 199 222 AATCACTCATTTGGTCCATTAGAT BLAST
Ll_transcript_248241; 40 63 AATCACTCATTTGGCCCGTTAGAT BLAST
Ll_transcript_113416; 508 533 AATTTCACTCATTTGGTCTGTTAGAT BLAST
Ll_transcript_113410; 508 533 AATTTCACTCATTTGGTCTGTTAGAT BLAST
Ll_transcript_182678; 163 186 AACCACTCATTTGGTCTGTTAGAT BLAST
Ll_transcript_158103; 63 88 AATTTCACTCATTTGGTCCATTAGAT BLAST
Ll_transcript_158109; 63 88 AATTTCACTCATTTGGTCCATTAGAT BLAST
Ll_transcript_158110; 63 88 AATTTCACTCATTTGGTCCATTAGAT BLAST
Ll_transcript_158120; 63 88 AATTTCACTCATTTGGTCCATTAGAT BLAST
Ll_transcript_158107; 63 88 AATTTCACTCATTTGGTCCATTAGAT BLAST
Ll_transcript_63433; 400 423 AAGCACTCATTTGGTCCATTAGAT BLAST
Ll_transcript_233697; 882 905 AATCACCTATTTGGTCCGTTAGAT BLAST
Ll_transcript_69629; 84 109 AATTTCACTTCTTTGGTCCGTTAGAT BLAST
Ll_transcript_69630; 84 109 AATTTCACTTCTTTGGTCCGTTAGAT BLAST
Ll_transcript_210298; 185 210 AATTTCAGTTATTTGGTCCGTTAGAT BLAST
Ll_transcript_210333; 75 100 AATTTCACTTATTTGGTCTGTTAGAT BLAST
Ll_transcript_63428; 153 176 AATCACCCATTTGATCCGTTAGAT BLAST
Ll_transcript_51855; 5 28 ACTCACCCATTTGGTCCGTTGGAT BLAST
Ll_transcript_433982; 192 217 AATTTCACTCATTTGGTCCGTTAGAT BLAST
Ll_transcript_482604; 31 56 AATTTCACTCATTTGGTCCGTTAGAT BLAST
Ll_transcript_512769; 40 65 AATTTCACTCATTTGGTCCGTTAGAT BLAST
Ll_transcript_341198; 397 422 AATTTCACTCATTTGGTCCGTTAGAT BLAST
Ll_transcript_341200; 397 422 AATTTCACTCATTTGGTCCGTTAGAT BLAST
Ll_transcript_368810; 151 174 AATCACCCATTTGGTCCGTTAGAT BLAST
Ll_transcript_368809; 82 105 AATCACCCATTTGGTCCGTTAGAT BLAST
Ll_transcript_344337; 129 154 AATTTCACTTATTTGGTCCGTTAGAT BLAST
Ll_transcript_283012; 186 209 TTTCATTCATTTGGTCCGTTAGAT BLAST
Ll_transcript_341253; 29 54 AATTTCACCCATTTGGTCCGTTAGAT BLAST
Ll_transcript_436681; 7335 7360 AATTTTACCCATTTGGTCCGTTAGAT BLAST
Ll_transcript_436669; 7404 7429 AATTTTACCCATTTGGTCCGTTAGAT BLAST
Ll_transcript_360107; 449 472 AATCACTCATTTGGCCCGTTAGAT BLAST
Ll_transcript_360089; 449 472 AATCACTCATTTGGCCCGTTAGAT BLAST
Ll_transcript_433983; 192 217 AATTTCACTCATTTGGTCCATTAGAT BLAST
Ll_transcript_511280; 15 40 AATTTCACTTCTTTGGTCCGTTAGAT BLAST
Ll_transcript_438786; 83 106 AATCACTCTTTTGGTCCGTTGGAT BLAST
Ll_transcript_520022; 168 191 AATCACCCATTTGGTCTGTTAGAT BLAST
Ll_transcript_433986; 1000 1025 AATTTCATTCATTTGTTCCGTTAGAT BLAST
Ll_transcript_349897; 9 34 AATTTCACCCATTTGGTCCATTAGAT BLAST
Ll_transcript_375967; 28 51 ACTCACTCTTTTGGTCCATTAGAT BLAST
Ll_transcript_474189; 26 51 AATTTTACCCATTTGGACCGTTAGAT BLAST
Ll_transcript_474189; 262 287 AATTTTACCCATTTGGACCGTTAGAT BLAST

Expression of siRNA 196


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)