Transcript | Ll_transcript_63623 |
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CDS coordinates | 109-2934 (+) |
Peptide sequence | MQPFSFSTSHFSLPTPPPFSFSSSNHHHHHHHHHSFISFSLKPPLDSNNFRRPTKPLKTTTTTTAAPSPNPTNPSSNSNNPLKQKTPSPNPLTGKLWLTSKLSPPPPPPERQFVDQVDAPKPERDEEDGKQNDVVSDDDNENLTISRQTGKIFVANLPLWVKKPEVFDFFRQFGPIKNVILIKGHNETKRNAGFGFVIYDGDETGAENSAMKAVEFDGVEFHGRVLTVKLDDGKRLRDKELERERWVKGNGDKGEYRSKWHEERDGSRKEFQKVLETEPENWQAVVSAFERIKKPARKEYGLMVKYYARRGDMHHARQAFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVKKMKEEGIEMTIVTYSIIVGGFARMGNADAADQWFNEAKERLTDLNAIIYGNIIYAHCQACHMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGKEDKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALEISKIMKMAGIKHNMKTYSMLIHGFLKLKDWANAFSIFEDITKDGLKPDVVLYNNIVSAFCGMGNMDRAICIVKKMQKERHRPTTRTFLPIIHGFARAGEMRKALEIFDMMRRSGCIPTVHTYNALLLGLVEKRQMEKAVRILDEMNLAGISPNERTYTNLMHGYASLGDTEKAFQYFTIMKNVGLEIDVYTYEALLKACCKSGRMQTALAVTKEMSTRKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRNEEVQPDIHTYTSFINACSKAGDMQKATEIIKEMEASGIKPNLKTYTTLIHGWARASLPEKALRCFEEMKVAGLKPDKAVYHCLMTSLLSRATFAQSYIYSGLLSVCREMIESEMTVDMGTAVHWSRCLLKIERTGGELTEALQKTFPPDWTSHHVDVNSGKETADPEIVVDDDDVYYGNGISNDEDNDDEDIDNDM* |
ORF Type | complete |
Blastp | Pentatricopeptide repeat-containing protein At5g04810, chloroplastic from Arabidopsis with 64.78% of identity |
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Blastx | Pentatricopeptide repeat-containing protein At5g04810, chloroplastic from Arabidopsis with 70.17% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT5G04810) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461472.1) |
Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer