ta-siRNA 198 details

ID198
SequenceCAGGATACCCCGTTTCGGACGT 

Targets of siRNA 198

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_79662; 848 869 ACGTCCGAAACGGGGTATCCTG BLAST
Ll_transcript_79652; 848 869 ACGTCCGAAACGGGGTATCCTG BLAST
Ll_transcript_79660; 848 869 ACGCCCGAAGCGGGGTATCCTG BLAST
Ll_transcript_507646; 79 100 ACGTCCGAAACGGGGTATCCTG BLAST
Ll_transcript_485236; 551 572 ACGTCCGAAACGGGGTATCCTG BLAST
Ll_transcript_485234; 572 593 ACGTCCGAAACGGGGTATCCTG BLAST
Ll_transcript_485226; 572 593 ACGTCCGAAACGGGGTATCCTG BLAST
Ll_transcript_485230; 572 593 ACGTCCGAAACGGGGTATCCTG BLAST
Ll_transcript_492169; 180 201 GCGCCCGAAGCGGGGTATCCTG BLAST
Ll_transcript_118809; 2761 2783 GTGTCAAGAAATGGGGTATCCTG BLAST
Ll_transcript_118812; 1498 1520 GTGTCAAGAAATGGGGTATCCTG BLAST
Ll_transcript_312064; 1863 1885 GTGTCAAGAAATGGGGTATCCTG BLAST
Ll_transcript_312066; 2683 2705 GTGTCAAGAAATGGGGTATCCTG BLAST
Ll_transcript_312068; 1420 1442 GTGTCAAGAAATGGGGTATCCTG BLAST

Expression of siRNA 198


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)