Transcript | Ll_transcript_112626 |
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CDS coordinates | 1308-2807 (+) |
Peptide sequence | MEEHPSELRVDSATDFDDGIQNVTEESSLLCTETRISVSPHAETSTSSDTRTELYGNITVDGSSRNVAASNQMMRLSEFEELVPPYQVSAGHSRHVSYRDSSNTASTSSVGQSSDPVSVNVSTNKDAINNVDDLVVNGVSQISSETMHPRRLTPQEHGNSSSGEYPVQNQTSAFIAIHSSSSDPVAQASNLRGNSQSLEEEPRRETIPSGLGILVSNRERGQGSDGMLQVDVVTISSNILSDRNADANGHDARRSGRRLFWDAFSRRSSRRLGNSATMVFSAGGADDPESQDRWLVDFGGDFSNDRVGGSSGYMGSRIHRLNEGMRHSRSEIWERLRGGLDEISQLNSPCPLGLHADGMCSCDSSPIAEESSTRASISRIVMLAEALFEVLDEIHRQPGSLSLSMASLPAPESIVDSFPLKSHKKVDAADDGNDIEQCYICLSEYEEGDQIRVLPCNHEYHMMCVDKWLKEIHGVCPLCRGNVCGGFPESATNSELPSH* |
ORF Type | complete |
Blastp | RING-H2 finger protein ATL52 from Arabidopsis with 46.67% of identity |
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Blastx | E3 ubiquitin-protein ligase RLIM from Homo with 39.44% of identity |
Eggnog | zinc ion binding(ENOG41121N2) |
Kegg | Link to kegg annotations (AT5G17600) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453130.1) |
Pfam | RING-H2 zinc finger domain (PF12678.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer