ta-siRNA 200 details

ID200
SequenceCGACTCTTCGGACTCGTCCATG 

Targets of siRNA 200

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_146471; 484 505 CATGGACGAGTCCGAAGAGTCG BLAST
Ll_transcript_146467; 523 544 CATGGACGAGTCCGAAGAGTCG BLAST
Ll_transcript_145021; 90 111 CTTGGACGAGTCCGAAGAGTCG BLAST
Ll_transcript_146464; 315 336 CATAGACGAGTCCGAAGAGTCG BLAST
Ll_transcript_146468; 520 541 CATGGACTAGTCCGAAGAGTCG BLAST
Ll_transcript_146472; 487 508 CATGGACTAGTCCGAAGAGTCG BLAST
Ll_transcript_422873; 89 110 CATGGACGAGTCCGAAGAGTCG BLAST
Ll_transcript_492177; 289 310 CTTGGACGAGTCCGAAGAGTCG BLAST
Ll_transcript_492174; 378 399 CTTGGACGAGTCCGAAGAGTCG BLAST
Ll_transcript_492181; 681 702 CTTGGACGAGTCCGAAGAGTCG BLAST
Ll_transcript_492189; 936 957 CTTGGACGAGTCCGAAGAGTCG BLAST
Ll_transcript_422875; 66 87 CATTGACGAGTCCGAAGAGTCG BLAST
Ll_transcript_510880; 367 388 CAAAGAAGAGTCCGAAGAGTCC BLAST
Ll_transcript_180035; 1543 1564 CATGGGCAGTCCGAAGAGATCA BLAST
Ll_transcript_515633; 1944 1965 CATGGGCAGTCCGAAGAGATCA BLAST

Expression of siRNA 200


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)