Transcript | Ll_transcript_75115 |
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CDS coordinates | 4146-6122 (+) |
Peptide sequence | MADLENMLLEAAGRTNSPVRKRSKIGNSRVKRDGAGSDSRVEDSDEGGASKKPSRSASHVPLKKRLDLSRRGSSTSKNEHGGGELVEDGVPVCEGGSGSSEESDVGSDLYKNEDDKQRLAKMTELEREMILSDRAAKKGEKEFKEKLKMKRDNNNNNNVNQSHHPSSSSKVRSSTRHAEKTAAKGDVLSELRAKRMKQQVLDTRGKSVGSASKPNSTNKGVKPKPTSPSSSSQSESGVRSDSERESSDDGGLADSDDDKNMVESNVPTFEDIKEITIRRSRLVKWLNEPFFEDLIVGCFVRIGIGRSESGPVYRLCMVQNVDAGDPNKPYKVENRVTHKYLICIWGSENSAKKFQVAVISDSTPLEKEYRQLLREVERSCSQMPSKLNVLEKREAIRRTNTYIYSAATVKQMLEEKKSASSRPLNIAVEKDRLKNQLEIAKSKNDGAEMDRILAKLQDLEVLRKARENDAKAIRLTEMNRKNKVENFKNLSEHKNVNVNLKAGEEGCDPFSRRWTRSRNYYTSEPGKENKDGEKNEAKGEKDKTVGEASMGEEKQVTTKVSIEATEVALQDSANEGKLGDTIAPADQITESHMLHDFELPISLDALKNFGGPQGLKNGFLARKQKIEATVGCQVSENDGSRHALTLTISDYKRRRGLL* |
ORF Type | complete |
Blastp | Protein RTF1 homolog from Arabidopsis with 53.03% of identity |
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Blastx | Protein SUPPRESSOR OF QUENCHING 1, chloroplastic from Arabidopsis with 67.7% of identity |
Eggnog | Rtf1, Paf1 RNA polymerase II complex component, homolog (S. cerevisiae)(COG5296) |
Kegg | Link to kegg annotations (AT1G61040) |
CantataDB | Link to cantataDB annotations (CNT0001568) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422536.1) |
Pfam | Plus-3 domain (PF03126.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer