Transcript | Ll_transcript_126939 |
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CDS coordinates | 99-1463 (+) |
Peptide sequence | MKGRTKVVLRHLPPSLSESSLFQQIDAVFSDRYHWFSFRPAKFSHKHTSYSRAYIDFKTPEDVIDFAHFFNGHLFVNEKGTQFKVLVEYAPSQRLPTHSSKKDARDATIYKDSDYLHFLQHLAKPVENLPSAEIQLEKRDAERSAAAKDVPIVTPLMDFVRQKRAAKGPRRSISNGKVSRKAGTLSNGSSSSATSRRGSGKKRVPTTMYVARNPGKSSTIKDKSTYTSVPRQGDQHLSNKTSTMGSSDGTQTLDENAGASGSNDAGKKKILLLKGKGREAITISDFDSMSQHKSVTSSAKTAPDSTALKRNQRPEGTGRIIRRILSNKDLLQSQSSRPHAEQQIQASSLEKEKQPPRSLHVPTILKSSNGTPENRIGVRDLHVSSERQERRVRHRDRPDRGIWTNRSNGGDDALSLSASSQAGGKAELKHERPNAGGGELKSLGGGRASHSSENG |
ORF Type | 3prime_partial |
Blastp | Regulator of nonsense transcripts UPF3 from Arabidopsis with 42.92% of identity |
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Blastx | Regulator of nonsense transcripts UPF3 from Arabidopsis with 67.9% of identity |
Eggnog | UPF3 regulator of nonsense transcripts homolog(ENOG41122XD) |
Kegg | Link to kegg annotations (AT1G33980) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440409.1) |
Pfam | Smg-4/UPF3 family (PF03467.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer