miRNA 204 details

Id Micro204
SequenceTAAGATCCGGACTACAACAAAG 
Annotated namesath-miR850; 
Annotated pre-miRNANone

Targets of miRNA 204

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_99642; FTRINITY_DN57190_c0_g2_i9 513 534 ATATGTTGTAGTTTGGGTTTTA BLAST psRNATarget
Ll_transcript_99632; FTRINITY_DN57190_c0_g2_i3 659 680 ATATGTTGTAGTTTGGGTTTTA BLAST psRNATarget
Ll_transcript_99640; FTRINITY_DN57190_c0_g2_i7 1020 1041 ATATGTTGTAGTTTGGGTTTTA BLAST psRNATarget
Ll_transcript_99641; FTRINITY_DN57190_c0_g2_i8 929 950 GTATGTTGTAGTTTGGGTTTTA BLAST psRNATarget
Ll_transcript_99638; FTRINITY_DN57190_c0_g2_i6 1599 1620 GTATGTTGTAGTTTGGGTTTTA BLAST psRNATarget
Ll_transcript_234760; FTRINITY_DN52897_c0_g2_i1 140 161 CAATGTTGTAGTCCTGATTTTA BLAST psRNATarget
Ll_transcript_79970; FTRINITY_DN58163_c3_g9_i1 279 299 CTTTGTGTAGTCCGGATTTTA BLAST psRNATarget
Ll_transcript_135206; FTRINITY_DN58067_c2_g2_i4 1141 1162 TCCTGTTGTGGTCTGGATTTTT BLAST psRNATarget
Ll_transcript_135207; FTRINITY_DN58067_c2_g2_i5 1249 1270 TCCTGTTGTGGTCTGGATTTTT BLAST psRNATarget
Ll_transcript_33144; FTRINITY_DN58731_c0_g1_i2 122 143 TGATATTGTGGTTCGGATTTTA BLAST psRNATarget
Ll_transcript_33146; FTRINITY_DN58731_c0_g1_i4 665 686 TGATATTGTGGTTCGGATTTTA BLAST psRNATarget
Ll_transcript_134464; FTRINITY_DN58011_c0_g1_i14 716 737 AGATGTTGTGGTCCGGGATTTA BLAST psRNATarget
Ll_transcript_134459; FTRINITY_DN58011_c0_g1_i10 716 737 AGATGTTGTGGTCCGGGATTTA BLAST psRNATarget
Ll_transcript_215093; FTRINITY_DN57711_c3_g11_i1 664 685 TGGTGTTTTAGTTTGGATTTTG BLAST psRNATarget
Ll_transcript_99641; FTRINITY_DN57190_c0_g2_i8 1048 1069 GTATGTTGTAGTTTCGGTTTTA BLAST psRNATarget
Ll_transcript_99638; FTRINITY_DN57190_c0_g2_i6 1718 1739 GTATGTTGTAGTTTCGGTTTTA BLAST psRNATarget
Ll_transcript_97495; FTRINITY_DN48444_c0_g1_i2 1687 1708 ATTTTTTGTAGTTTTGATCTTA BLAST psRNATarget
Ll_transcript_97494; FTRINITY_DN48444_c0_g1_i1 2397 2418 ATTTTTTGTAGTTTTGATCTTA BLAST psRNATarget
Ll_transcript_19843; FTRINITY_DN7159_c0_g1_i1 66 87 TCTTGTTGTGCTCTGGATTTTG BLAST psRNATarget
Ll_transcript_235301; FTRINITY_DN52837_c0_g1_i4 245 266 GTTTTTTATGGTTTGGATCTTA BLAST psRNATarget
Ll_transcript_235302; FTRINITY_DN52837_c0_g1_i5 245 266 GTTTTTTATGGTTTGGATCTTA BLAST psRNATarget
Ll_transcript_224051; FTRINITY_DN53118_c1_g3_i2 674 695 CATGGTTGTAATTTGGATCTTA BLAST psRNATarget
Ll_transcript_224044; FTRINITY_DN53118_c1_g3_i1 1253 1274 CATGGTTGTAATTTGGATCTTA BLAST psRNATarget
Ll_transcript_253437; FTRINITY_DN52529_c3_g1_i5 1233 1254 TACAGTTGTGGTTTGGATTTTG BLAST psRNATarget
Ll_transcript_253438; FTRINITY_DN52529_c3_g1_i6 1255 1276 TACAGTTGTGGTTTGGATTTTG BLAST psRNATarget
Ll_transcript_253436; FTRINITY_DN52529_c3_g1_i4 1351 1372 TACAGTTGTGGTTTGGATTTTG BLAST psRNATarget
Ll_transcript_47322; FTRINITY_DN38833_c0_g1_i1 29 50 AGTGGTGGTAGTTCGGATCTTT BLAST psRNATarget
Ll_transcript_217410; FTRINITY_DN56307_c3_g6_i3 539 560 AAGTGTTGTGGTTTGTGTCTTA BLAST psRNATarget
Ll_transcript_294366; TRINITY_DN7281_c0_g1_i1 118 139 TATTGTTGTAGTTTGGATTTTA BLAST psRNATarget
Ll_transcript_351095; TRINITY_DN52405_c0_g7_i1 196 217 GTATGTTGTAGTTTGGGTTTTA BLAST psRNATarget
Ll_transcript_531394; TRINITY_DN50063_c0_g3_i3 1020 1041 ATATGTTGTAGTTTGGGTTTTA BLAST psRNATarget
Ll_transcript_531389; TRINITY_DN50063_c0_g3_i1 1080 1101 ATATGTTGTAGTTTGGGTTTTA BLAST psRNATarget
Ll_transcript_531417; TRINITY_DN50063_c0_g3_i13 1169 1190 ATATGTTGTAGTTTGGGTTTTA BLAST psRNATarget
Ll_transcript_464716; TRINITY_DN52660_c0_g1_i1 284 304 CTTTGTGTAGTCCGGATTTTA BLAST psRNATarget
Ll_transcript_438638; TRINITY_DN48366_c3_g4_i4 521 542 TCCTGTTGTGGTCTGGATTTTT BLAST psRNATarget
Ll_transcript_438650; TRINITY_DN48366_c3_g4_i10 570 591 TCCTGTTGTGGTCTGGATTTTT BLAST psRNATarget
Ll_transcript_438642; TRINITY_DN48366_c3_g4_i6 678 699 TCCTGTTGTGGTCTGGATTTTT BLAST psRNATarget
Ll_transcript_497126; TRINITY_DN50229_c1_g2_i2 84 105 TGATATTGTGGTTCGGATTTTA BLAST psRNATarget
Ll_transcript_497122; TRINITY_DN50229_c1_g2_i1 522 543 TGATATTGTGGTTCGGATTTTA BLAST psRNATarget
Ll_transcript_459963; TRINITY_DN51163_c1_g1_i18 959 980 AGATGTTGTGGTCCGGGATTTA BLAST psRNATarget
Ll_transcript_276259; TRINITY_DN45788_c0_g1_i1 650 671 TGGTGTTTTAGTTTGGATTTTG BLAST psRNATarget
Ll_transcript_351095; TRINITY_DN52405_c0_g7_i1 315 336 GTATGTTGTAGTTTCGGTTTTA BLAST psRNATarget
Ll_transcript_355685; TRINITY_DN45895_c4_g2_i15 434 455 ATTTGTTGAAGTCTGGGTTTTT BLAST psRNATarget
Ll_transcript_355680; TRINITY_DN45895_c4_g2_i13 434 455 ATTTGTTGAAGTCTGGGTTTTT BLAST psRNATarget
Ll_transcript_428517; TRINITY_DN42003_c0_g1_i1 1687 1708 ATTTTTTGTAGTTTTGATCTTA BLAST psRNATarget
Ll_transcript_428518; TRINITY_DN42003_c0_g1_i2 2561 2582 ATTTTTTGTAGTTTTGATCTTA BLAST psRNATarget
Ll_transcript_359154; TRINITY_DN47650_c3_g1_i3 922 943 GTTTTTTATGGTTTGGATCTTA BLAST psRNATarget
Ll_transcript_359151; TRINITY_DN47650_c3_g1_i1 979 1000 GTTTTTTATGGTTTGGATCTTA BLAST psRNATarget
Ll_transcript_314913; TRINITY_DN46701_c0_g3_i2 583 604 CATGGTTGTAATTTGGATCTTA BLAST psRNATarget
Ll_transcript_314910; TRINITY_DN46701_c0_g3_i1 1162 1183 CATGGTTGTAATTTGGATCTTA BLAST psRNATarget
Ll_transcript_507822; TRINITY_DN21320_c0_g1_i1 500 521 TACAGTTGTGGTTTGGATTTTG BLAST psRNATarget

Expression of miRNA 204


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)