Transcript | Ll_transcript_71651 |
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CDS coordinates | 251-2185 (+) |
Peptide sequence | MNPVIQCFVSNVSPIAGIAFPTRIDNSLTTLSLSRSAVKSRSSTRRCLLPSFVAGGVFQQNKRRLSFCRKSRAISATGTEIAVEEPGSVVVGDISGETPSDEIGISDDSSPKSDVKPALAKANSLRPASARRSDMPHVETEDLIPGTTFTGKVKSVQPFGAFIDFGAFTDGLVHVSMLSDDYVKDVSSVVSVGQEVKVKLIEVNTETRRISLSMRENADTGKQRKEAPINAEKGGPGKRNTSKPGPRRDGGRKSSKFVIGQELQGTVKNMTRSGAFISLPDGEEGFLPISEEPDDGFGNVMGNTSLEVGQEVSVRVLRISRGQATLTMKKAEDAVKVDTVLGEGVVHVATNPFLLAFRKNKDIAKFLDEREKIQNTVENSSTTKTSEDVKETVKEAEAVVKDEPESIETLIDDAPSADDISEEDAGASAFDGSSIAIVDDERDSVPNLSSQAPSIDDAAEKDTKEVASGSLAPEGDLSTLNPIIEEATQADVTTSTIETESPLETANGNIIESGVDPIIVEDEQSQTSNTKEGFAAAALTDSDVVEPSPDNVDTIAPPPQETADEAEENDQVPPPETPATEVIEGSIEEPKEEQNQSPNTENENLLTSQVEHKEVTIASEENNASSNSNGQTSTTPSDEGSLQG* |
ORF Type | complete |
Blastp | 30S ribosomal protein S1 homolog from Bacillus with 34.36% of identity |
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Blastx | 30S ribosomal protein S1 homolog from Bacillus with 34.36% of identity |
Eggnog | thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (By similarity)(COG0539) |
Kegg | Link to kegg annotations (BSU22880) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457841.1) |
Pfam | S1 RNA binding domain (PF00575.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer