Protein coding transcript 208005

• Transcript: Ll_transcript_71642
• CDS coordinates: 1708-3423 (+)
• Peptide sequence: MNPVIPCSVSNVSLIPGVAFPTRTNNSLTTLSLSKSSVKSVSSTRRCLLPSFVANGVFPKNKRRFSFHKKSRTSISATTETEVAVEEPGSTVAGEVSGETPSDDVGTSEDSSPKSDAKSDPAKANRSRPASARRSDLPPVKNEDLIPGATFTGKVKSIQPFGAFIDFGAFTDGLVHVSMLSDDYVKDVSKVVSVGQEVKVKLIEVNTETRRISLSMRENADTGKQRKETSTNAEKGGPGKRNTSKPGPRKDGGRKSSKFVIGQDLQGTVKNMTRSGAFISLPDGEEGFLPISEEPDDGFGNVMGNTSLEVGQEVSVRVLRISRGQATLTMKKAEDAVKVDTVLGEGVVHVATNPFLLAFRKNKDIAKFLDEREKIQNTVENSSTTKTSEDVKETVKEAEAVVKDEPESIETLIDDAPSADDISEEDAGASAFDGSSIAIVDDERDSVPNLSSQAPSIDDAAEKDTKEVASGSLAPEGDLSTLNPIIEEATQADVTTSTIETESPLETANGNIIESGVDPIIVEDEQSQTSNTKEGFAAAALTDSDVVEPSPDNVDTIAPPPQETAGCVYSI*
• ORF Type: complete

Annotations of Ll_transcript_71642

• Blastp: 30S ribosomal protein S1 homolog from Bacillus with 34.36% of identity
• Blastx: Elongation factor Ts from Prochlorococcus with 64.41% of identity
• Eggnog: thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (By similarity)(COG0539)
• Kegg: Link to kegg annotations (BSU22880)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457841.1)
• Pfam: S1 RNA binding domain (PF00575.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;