miRNA 209 details

Id Micro209
SequenceTACGCAGGAGAGATGACGCCG 
Annotated namesmdm-miR391; 
Annotated pre-miRNANone

Targets of miRNA 209

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_110861; FTRINITY_DN55469_c0_g1_i5 1436 1456 TGGTATCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_110873; FTRINITY_DN55469_c0_g1_i12 1603 1623 TGGTATCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_110856; FTRINITY_DN55469_c0_g1_i3 1730 1750 TGGTATCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_110877; FTRINITY_DN55469_c0_g1_i15 1743 1763 TGGTATCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_110878; FTRINITY_DN55469_c0_g1_i16 1780 1800 TGGTATCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_68751; FTRINITY_DN55020_c0_g2_i2 221 241 GAGTGTCTTTTCTTCTGTGTA BLAST psRNATarget
Ll_transcript_68744; FTRINITY_DN55020_c0_g2_i1 221 241 GAGTGTCTTTTCTTCTGTGTA BLAST psRNATarget
Ll_transcript_161610; FTRINITY_DN47946_c0_g1_i4 859 879 GTGGGTCATCTCTTCTGCTTA BLAST psRNATarget
Ll_transcript_161609; FTRINITY_DN47946_c0_g1_i3 960 980 GTGGGTCATCTCTTCTGCTTA BLAST psRNATarget
Ll_transcript_248255; FTRINITY_DN55972_c2_g1_i1 192 212 TGGCTTCATCTTTTCTGCATA BLAST psRNATarget
Ll_transcript_192665; FTRINITY_DN55785_c1_g1_i2 36 56 GGGTTTCATTTCTCTTGTGTG BLAST psRNATarget
Ll_transcript_192664; FTRINITY_DN55785_c1_g1_i1 36 56 GGGTTTCATTTCTCTTGTGTG BLAST psRNATarget
Ll_transcript_198752; FTRINITY_DN49797_c0_g2_i1 442 462 CCGTGTCATTTCTTTTGTGTC BLAST psRNATarget
Ll_transcript_5828; FTRINITY_DN58540_c0_g1_i3 417 437 GGGTTTCATTTCTCTTGTGTG BLAST psRNATarget
Ll_transcript_14161; FTRINITY_DN59216_c1_g2_i27 324 344 TTATGTTATTTTTCCTGTGTA BLAST psRNATarget
Ll_transcript_128527; FTRINITY_DN53492_c0_g7_i5 486 506 AAGTGTTATTTTTCTTGTGTG BLAST psRNATarget
Ll_transcript_128509; FTRINITY_DN53492_c0_g7_i1 759 779 AAGTGTTATTTTTCTTGTGTG BLAST psRNATarget
Ll_transcript_51511; FTRINITY_DN58834_c2_g7_i1 18 38 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_191239; FTRINITY_DN55787_c0_g1_i26 228 248 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_191206; FTRINITY_DN55787_c0_g1_i4 61 81 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_191223; FTRINITY_DN55787_c0_g1_i15 228 248 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_191222; FTRINITY_DN55787_c0_g1_i14 228 248 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_191203; FTRINITY_DN55787_c0_g1_i3 356 376 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_191230; FTRINITY_DN55787_c0_g1_i21 356 376 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_191225; FTRINITY_DN55787_c0_g1_i16 356 376 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_485011; TRINITY_DN49381_c1_g3_i8 1437 1457 TGGTATCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_484987; TRINITY_DN49381_c1_g3_i1 1590 1610 TGGTATCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_484990; TRINITY_DN49381_c1_g3_i2 1781 1801 TGGTATCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_485017; TRINITY_DN49381_c1_g3_i10 2155 2175 TGGTATCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_492297; TRINITY_DN52891_c52_g1_i1 45 65 AAGAGTTATCTTTTCTGTGTA BLAST psRNATarget
Ll_transcript_503567; TRINITY_DN42116_c0_g1_i1 900 920 GTGGGTCATCTCTTCTGCTTA BLAST psRNATarget
Ll_transcript_503569; TRINITY_DN42116_c0_g1_i3 900 920 GTGGGTCATCTCTTCTGCTTA BLAST psRNATarget
Ll_transcript_438627; TRINITY_DN48366_c3_g6_i1 129 149 TGGCTTCATCTTTTCTGCATA BLAST psRNATarget
Ll_transcript_276059; TRINITY_DN37718_c0_g1_i1 161 181 CCGTGTCATTTCTTTTGTGTC BLAST psRNATarget
Ll_transcript_356126; TRINITY_DN45810_c3_g7_i1 22 42 GGGTTTCATTTCTCTTGTGTG BLAST psRNATarget
Ll_transcript_399034; TRINITY_DN51912_c1_g1_i18 424 444 GGGTTTCATTTCTCTTGTGTG BLAST psRNATarget
Ll_transcript_399027; TRINITY_DN51912_c1_g1_i13 424 444 GGGTTTCATTTCTCTTGTGTG BLAST psRNATarget
Ll_transcript_338950; TRINITY_DN48531_c1_g1_i4 712 732 AAGTGTTATTTTTCTTGTGTG BLAST psRNATarget
Ll_transcript_379329; TRINITY_DN50741_c1_g3_i4 145 165 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_379324; TRINITY_DN50741_c1_g3_i2 348 368 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_379331; TRINITY_DN50741_c1_g3_i5 372 392 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_379323; TRINITY_DN50741_c1_g3_i1 378 398 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_379345; TRINITY_DN50741_c1_g3_i10 326 346 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_379344; TRINITY_DN50741_c1_g3_i9 348 368 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_379325; TRINITY_DN50741_c1_g3_i3 372 392 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget
Ll_transcript_379340; TRINITY_DN50741_c1_g3_i7 378 398 GTTCTTCATTTCTCTTGTGTA BLAST psRNATarget

Expression of miRNA 209


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)