Transcript | Ll_transcript_60559 |
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CDS coordinates | 1-3609 (+) |
Peptide sequence | TLTPKYDHIIVAIEESKDLSNYKLEELQSSLEAHEQRLKERLGENNDDHALQAQQSKKLAGQWNKNRKGKDKWQSEKCRNCLGSRNEEGSSSSQKQFNSVINSATNSSDHKRNSVKNLVTRRKGDKSRVQCYNCRNYGHYAAECRMNRNSIKKDEEVKMAQGEGSDGEEKFLLMATVTEKSEDANVWYLDTGCSNHMTGKKDWFTSLDETTRSKIKFADNSAVSAEGIGNIMIQRKDGKKAYISNVLYVPRMKSNLISLGQLLEKGYSMEMKDGMLKVFDKNNQSILGAPLSANRTFKVEIHVADQNCFQSTTDRETWLWHQRYGHLNLKSLNMLSKNGLVIGLPQTRVLEQLCVECISGKQSRNSFVSHVSTKSVKKLELVYTDVCGPFEENSIGSNRYFVTFIDDHTRKIWIYPMKRKSEVLEIFKRFRSQAEKQSENKLKQLRSDGGGEYVSTEFHEFCTKEGIVHEIVAPYTPQHNGTAERANRTILNMTRCMLKTKSLPKMFWAEAVSTAAYILNRCPSSRLNNKTPEEAWTGLKPSVKHMRTFGCICYKHVPEVKRKKLDDRGERLIFLGYHSTGAYRVFDPEKNKVMVSRDLKFDEDQCWTWNLKESEGIKNTLLQFENAEENLIESEDVTTIEVTNSTINPSTRQRQRQPPSRLSDYEIFPDSTITAEGDFVHMALLAEMEPVKVEDALQQSHWIEAMQDELVSIERNKTWSLMDLPKGKKAITVKWVYKTKLNPNGEVSKYKARLVAKGYLQKQGLDYDEVFAPVARLETVRLVIAIASHQSWEIHQMDVKSAFLNGPLEKEVYVTQPPGFEVKGREEMVFKLHKALYGLKQAPRAWNKRIDAFLTQLEFVKCTAEYGVYVKGNGITDLLIVCLYVDDLLITSSSIEDITTFKQQMHSEFDMSDLGQLAYFLGIEFKRTETGTFMHQTKYTMDVLRRFEMIGCNSISTPAESGIAVAQASEEQHEVDKTWFRQIVGSLRYICNTRPDIAYGVGLVSRYMEDPQQSHMVAVKRLLRYLKGTIGLGINFPSKQSCLSDTKLVGFTDADWSGDKVDRKSTSGYLFSFGEAPIRWCSKKQDVVALSSCEAEYIAACMCTCQAVWMRVLLGELKIRTEEGILLKVDNKSAINLAMNPVSHGRSKHIETRFHYIRDQVSKGVVKLEFCRSEHQLADVFTKPLKRDRFEKLRMINGVTKA* |
ORF Type | 5prime_partial |
Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 36.66% of identity |
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Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 36.64% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_020987654.1) |
Pfam | Zinc knuckle (PF00098.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer