miRNA 215 details

Id Micro215
SequenceTATGGATGGAGGTGTAACCCGATG 
Annotated namesosa-miR1874-3p; 
Annotated pre-miRNANone

Targets of miRNA 215

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_233294; FTRINITY_DN67525_c0_g1_i1 469 492 CATTGGGTTGCATCTCTATGCATA BLAST psRNATarget
Ll_transcript_68293; FTRINITY_DN55084_c0_g3_i1 741 764 TCTTAGGTTATATCTCTATTTATG BLAST psRNATarget
Ll_transcript_18112; FTRINITY_DN54564_c0_g2_i1 275 298 ACACATGTTACATTTTCATTCATA BLAST psRNATarget
Ll_transcript_172463; FTRINITY_DN57029_c0_g6_i2 142 165 CCTCTGTTTCCATTTCCATCCATA BLAST psRNATarget
Ll_transcript_197004; FTRINITY_DN54311_c1_g1_i4 143 166 AAGTTTGTTACACTTCCAACCATA BLAST psRNATarget
Ll_transcript_197003; FTRINITY_DN54311_c1_g1_i3 143 166 AAGTTTGTTACACTTCCAACCATA BLAST psRNATarget
Ll_transcript_145154; FTRINITY_DN59069_c6_g1_i1 131 154 TTTTTGGTTTCACCTCCTTTCATA BLAST psRNATarget
Ll_transcript_48282; FTRINITY_DN76952_c0_g1_i1 160 183 TATCGGTTTACATTTTTATTCATA BLAST psRNATarget
Ll_transcript_116819; FTRINITY_DN50993_c0_g1_i5 331 354 TTTTGGGTTACATCTCTGTATATA BLAST psRNATarget
Ll_transcript_259953; FTRINITY_DN57995_c2_g1_i8 696 719 CTTTGGGTTTCGCCTCCATTTATT BLAST psRNATarget
Ll_transcript_259946; FTRINITY_DN57995_c2_g1_i2 547 570 CTTTGGGTTTCGCCTCCATTTATT BLAST psRNATarget
Ll_transcript_259945; FTRINITY_DN57995_c2_g1_i1 621 644 CTTTGGGTTTCGCCTCCATTTATT BLAST psRNATarget
Ll_transcript_259948; FTRINITY_DN57995_c2_g1_i4 696 719 CTTTGGGTTTCGCCTCCATTTATT BLAST psRNATarget
Ll_transcript_109021; FTRINITY_DN51484_c0_g1_i1 2209 2232 TATTTGGTTGCACTTTCATGCATG BLAST psRNATarget
Ll_transcript_109022; FTRINITY_DN51484_c0_g1_i2 2209 2232 TATTTGGTTGCACTTTCATGCATG BLAST psRNATarget
Ll_transcript_213136; FTRINITY_DN58397_c0_g2_i17 27 50 ATTAGGGTTATACTTTCGTGCATA BLAST psRNATarget
Ll_transcript_167280; FTRINITY_DN57394_c1_g3_i3 148 171 AATTTGGTTTCACCTCCATCTGCA BLAST psRNATarget
Ll_transcript_77812; FTRINITY_DN44186_c0_g1_i2 112 135 GTATGGTTTGCATCTCTATCCATC BLAST psRNATarget
Ll_transcript_148939; FTRINITY_DN57654_c1_g4_i2 114 137 AATTCGGTAACATCTTCATTTGTA BLAST psRNATarget
Ll_transcript_90535; FTRINITY_DN53907_c2_g3_i1 1126 1149 AATTTGGATATATCTTTATTCATA BLAST psRNATarget
Ll_transcript_186676; FTRINITY_DN51845_c0_g1_i2 192 215 GCATGGTTTACATTTTTATCCATG BLAST psRNATarget
Ll_transcript_33441; FTRINITY_DN58791_c0_g7_i1 308 331 TATTAGTATACATCTTCATTCATA BLAST psRNATarget
Ll_transcript_123329; FTRINITY_DN53746_c4_g1_i2 170 193 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_123333; FTRINITY_DN53746_c4_g1_i6 170 193 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_123336; FTRINITY_DN53746_c4_g1_i9 170 193 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_123337; FTRINITY_DN53746_c4_g1_i10 170 193 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_123334; FTRINITY_DN53746_c4_g1_i7 170 193 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_123338; FTRINITY_DN53746_c4_g1_i11 170 193 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_123330; FTRINITY_DN53746_c4_g1_i3 170 193 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_123339; FTRINITY_DN53746_c4_g1_i12 170 193 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_123331; FTRINITY_DN53746_c4_g1_i4 170 193 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_123332; FTRINITY_DN53746_c4_g1_i5 170 193 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_243639; FTRINITY_DN47307_c0_g1_i2 2292 2315 TAGCGGCATTCACCTTCATCCATA BLAST psRNATarget
Ll_transcript_243638; FTRINITY_DN47307_c0_g1_i1 2292 2315 TAGCGGCATTCACCTTCATCCATA BLAST psRNATarget
Ll_transcript_112689; FTRINITY_DN55434_c5_g1_i3 131 154 CTAGGAGTTACATCTCCGTTCATT BLAST psRNATarget
Ll_transcript_500599; TRINITY_DN47343_c3_g2_i8 167 190 TTATAGGTTGCATTTCTATCCATG BLAST psRNATarget
Ll_transcript_500596; TRINITY_DN47343_c3_g2_i7 167 190 TTATAGGTTGCATTTCTATCCATG BLAST psRNATarget
Ll_transcript_500606; TRINITY_DN47343_c3_g2_i11 167 190 TTATAGGTTGCATTTCTATCCATG BLAST psRNATarget
Ll_transcript_500588; TRINITY_DN47343_c3_g2_i4 325 348 TTATAGGTTGCATTTCTATCCATG BLAST psRNATarget
Ll_transcript_500586; TRINITY_DN47343_c3_g2_i2 326 349 TTATAGGTTGCATTTCTATCCATG BLAST psRNATarget
Ll_transcript_500585; TRINITY_DN47343_c3_g2_i1 326 349 TTATAGGTTGCATTTCTATCCATG BLAST psRNATarget
Ll_transcript_290503; TRINITY_DN39380_c0_g1_i1 599 622 CATTGGGTTGCATCTCTATGCATA BLAST psRNATarget
Ll_transcript_403972; TRINITY_DN50572_c3_g1_i2 460 483 TCTTAGGTTATATCTCTATTTATG BLAST psRNATarget
Ll_transcript_308488; TRINITY_DN68174_c0_g1_i1 329 352 AGAAGGATTATACCTTCATTTATA BLAST psRNATarget
Ll_transcript_390563; TRINITY_DN46487_c6_g2_i1 89 112 AAGTTTGTTACACTTCCAACCATA BLAST psRNATarget
Ll_transcript_390564; TRINITY_DN46487_c6_g2_i2 89 112 AAGTTTGTTACACTTCCAACCATA BLAST psRNATarget
Ll_transcript_423668; TRINITY_DN47966_c9_g1_i1 353 376 TCAATAGTTACATCTTCATTCATG BLAST psRNATarget
Ll_transcript_374979; TRINITY_DN47723_c1_g2_i1 177 200 CCTCTGTTTCCATTTCCATCCATA BLAST psRNATarget
Ll_transcript_385806; TRINITY_DN47284_c0_g1_i2 275 298 ACACATGTTACATTTTCATTCATA BLAST psRNATarget
Ll_transcript_483703; TRINITY_DN49333_c0_g1_i1 61 84 TTCTTAGTTACACCACTATCCATA BLAST psRNATarget
Ll_transcript_451139; TRINITY_DN50673_c4_g1_i14 2516 2539 TATCGGTTTACATTTTTATTCATA BLAST psRNATarget
Ll_transcript_451125; TRINITY_DN50673_c4_g1_i1 3450 3473 TATCGGTTTACATTTTTATTCATA BLAST psRNATarget
Ll_transcript_451138; TRINITY_DN50673_c4_g1_i13 2906 2929 TATCGGTTTACATTTTTATTCATA BLAST psRNATarget
Ll_transcript_360871; TRINITY_DN47641_c2_g2_i6 2168 2191 TATTTGGTTGCACTTTCATGCATG BLAST psRNATarget
Ll_transcript_360870; TRINITY_DN47641_c2_g2_i5 2168 2191 TATTTGGTTGCACTTTCATGCATG BLAST psRNATarget
Ll_transcript_360861; TRINITY_DN47641_c2_g2_i3 2168 2191 TATTTGGTTGCACTTTCATGCATG BLAST psRNATarget
Ll_transcript_339723; TRINITY_DN76149_c0_g1_i1 79 102 AAGCGGGTTTCACTTCCATTCACA BLAST psRNATarget
Ll_transcript_332677; TRINITY_DN75402_c0_g1_i1 24 47 TTTTGGCTTCTACCTCTGTCCATA BLAST psRNATarget
Ll_transcript_448277; TRINITY_DN51802_c0_g3_i23 602 625 ATTAGGGTTATACTTTCGTGCATA BLAST psRNATarget
Ll_transcript_451721; TRINITY_DN42787_c0_g1_i1 441 464 GTGAGGGTTGTGCCTCTTTCCATA BLAST psRNATarget
Ll_transcript_513579; TRINITY_DN46822_c8_g8_i2 173 196 AATTTGGATATATCTTTATTCATA BLAST psRNATarget
Ll_transcript_344818; TRINITY_DN50449_c0_g1_i16 157 180 AATTTGGTTTCACCTCCATCTGCA BLAST psRNATarget
Ll_transcript_436078; TRINITY_DN48933_c2_g9_i2 125 148 AATTCGGTAACATCTTCATTTGTA BLAST psRNATarget
Ll_transcript_524285; TRINITY_DN22794_c0_g1_i1 151 174 CATGAAGTTATATCTCCATACATA BLAST psRNATarget
Ll_transcript_353057; TRINITY_DN49444_c0_g1_i1 360 383 TATTAGTATACATCTTCATTCATA BLAST psRNATarget
Ll_transcript_291161; TRINITY_DN49188_c5_g2_i6 233 256 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_291155; TRINITY_DN49188_c5_g2_i3 233 256 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_291162; TRINITY_DN49188_c5_g2_i7 233 256 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_291159; TRINITY_DN49188_c5_g2_i4 233 256 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_291165; TRINITY_DN49188_c5_g2_i8 233 256 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_291154; TRINITY_DN49188_c5_g2_i2 233 256 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_291151; TRINITY_DN49188_c5_g2_i1 233 256 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_291160; TRINITY_DN49188_c5_g2_i5 233 256 CGCTGGCTCACACATCCATCCATA BLAST psRNATarget
Ll_transcript_527447; TRINITY_DN43310_c0_g1_i1 2311 2334 TAGCGGCATTCACCTTCATCCATA BLAST psRNATarget
Ll_transcript_527448; TRINITY_DN43310_c0_g1_i2 2311 2334 TAGCGGCATTCACCTTCATCCATA BLAST psRNATarget
Ll_transcript_527449; TRINITY_DN43310_c0_g1_i3 2311 2334 TAGCGGCATTCACCTTCATCCATA BLAST psRNATarget

Expression of miRNA 215


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)