Protein coding transcript 215515

TranscriptLl_transcript_201038
CDS coordinates520-4110 (+)
Peptide sequenceMESVHHALHLSDLDPEPGVVLVWFLFTILSWLLEASLDDEGLLEHKPTWLHHDDDDDDGDDVIMSEPENEALLRKNTGMTIELIALFLQNKLTSRILSLLHKNMPTHWETFVHQLQRLAANSLVLRSLKNVTPESLLSFTIKSDGLKLLSSQWKTTHKLELNAVMAAGAASQISCALQTHDDSWSLLWLPIDLILEDAMNGDHVAETSAVEVLTGLVKSLQAVNGTAWHNAFLGLWMAALRLVQRERDPSEGPVPRLDTCLCMLLCITTLVVANIIEEEEGELIVEAERSPTNQRKDKPALGERRGELVISLQLLGDYEGLLNPPQPVTWVANQAAAKAVMFVSGHAVGNGYLESMNVNDLPTNYSGNLWHLIVEACIARHLLDTSAYFWPGYVSAPCNQIPHSIPNHLPSWSSLMKGSPLTPPLVNVLAATPASSLAEMEKIFEFAINGSDEEKISAATILCGASLVRGWNVQEHIIFFMIKLLSPPVPPKYSGTESHLISYAPLLNVLLVGISPVDCVQIFSLHGAVPLLAAVLMPICEAFGSCLPNVSWTAATGEKLSCHAVFSNAFILLLRLWRFNHPPLDHVMGGAATPALGSQLGPEYLLLVRNCMLASFGKLPRFVVSSRRFSKMISFSTDPIFMDSFPKLNIWYRQHQECIASIRSGLVPGGPVHQIVDALLNIMFRKINKGAETLTPMPLGSSSSSGSDMDVDALVKLKVPAWDILKVIPFVLDASLTACAHGRLSTRQLATGLKSLADFLPASLVTIASYFSAEVTRGVWKPAFMNGTDWPSPAANLSLVEQQIKKILEATGVDVPSLVVDGDSPATLPLPLAAFVSLTITYKLDKASERLLKLISPAMSALASSCPWPCMPIVTSLWVQKVKRWSNYLVFLASGTVFHHNRDAVVQLLRSCFTSTLGLGSASASIYNNSGVSALLGHGFGCKIPGGVSPVAPGILYLKVYRSIGDTSFLTEEILSILMLSVRDIASSELPKAKGDVKKTKHGMKNGQFSLARSMQHVKHAALLGASLLWISGGPKLVQSLMKETLPSWFLSTNMLELDGGESGVLVAMLRGYALAYFAIFSGTFAWGIDHSFICSKRRAKVLSRHVKFLASTLDKEISLRCHCATWRAYVTGFVSLMVACTPLWVPEVDADTLKRLSRGLIRFNEYQLAFRLLELGGIPVMAAAAEMIIELQHTF*
ORF Typecomplete

Annotations of Ll_transcript_201038

BlastpMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 55.37% of identity
BlastxMediator of RNA polymerase II transcription subunit 33A from Arabidopsis with 54.32% of identity
EggnogComponent of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator(ENOG410XPER)
KeggLink to kegg annotations (AT3G23590)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019442503.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;


Loading content...

Grab and slide to change sequence position

Alignmet by MSA Viewer