Transcript | Ll_transcript_84560 |
---|---|
CDS coordinates | 170-6250 (+) |
Peptide sequence | MASPSPRNRIHKFYASKKRKAVSPVAKVGKSEKGARHGGDGSPSAKGTLDSYLVASQDDCNAARLSNMPSDSLTRQDLVKRNLALEINSASDNELDKPPVYSVRGHQDFEANQLRLINELPKASGMEVEDPVQENNCNDFKQGAVKSELKQFAEDFLSLYCSDLRPSVNSPSEMKVNDHKRHDFMTLEVESNSLAQKFSDTGKCGENISSAKIPEDIKSGAVGNTMAMAYVSCCSTKVSGGGDAIALDTSLRKCSYTPKSPKNMAAYCTPGSLIVKTHVKETPKSTRGSSMFSPGEAFWNEAIQLVDGLSVPMANGSKDNVMEERLEMESSCNVQNCDGKPRKIFDESKSRLWNTEMSTSQGLVGMHTKDPSKEESRLPVKHFDFSCEDSNLDENTMQNCSAGNLTNINCGTGRGYKSGSLKGHMHGKMNEEQQEILVDAVCKRVNFSSQDNVSMAFNSPLYDARTAIRTHASDESTPSSGVSLNDHLDLNSWLPPEICSIYRKKGISKLYRWQVDCLRVDGVLQRRNLVYCASTSAGKSFVAEILMLRRVITTGKMALLVLPYVSICAEKAEHLERLLEPLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEEGRLSEMGIIVIDELHMVGDRSRGYLLELMLTKLRYAAGEGISKSNSESSGGSSDKADPAQGLQIVGMSATMPNVAAVADWLQAALYETEFRPVPLEEYIKVGNCIYNKSMELTRTISKATDLGGKDPDHVVELCNEVVQEGQSVLIFCSSRKGCESTARHVAKFLKSFIPDVLEKDCEFADINAAIDSLRKAPAGLDPILEETLPSGVAFHHAGLTVEEREIIETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYKQMAGRAGRTGIDTKGESVLICKPEEIKKVTGLLNGSCSPLHSCLSEDMNGMIHAILEVVAGGIVQTASDIHRYVRCTLLNSTKPFEEVVKSAQESLKWLCQRKFLEWNEDTKLYSTTPLGRASFGSSLCPEESLIVLADISRAREGFVLASDLHIVYLVTPINVDVEPDWELYYERFVKLSPLDQSVGNRVGVTEPFLMRMAHGAPVRGSNKSRDNTRWLHNTRGNQLGISSGTSNSDDHTLRVCRRFYVALILSLLVQEAPVGEVCEAFKVARGMVQALQENAGRFASMVAVFCERLGWHDLEGIVAKFQNRVSFGVRAEVVELTTIPFVKGSRARALYKAGLRTPLAIAEASIPEIVKALFESSSWATDEGSARRISQFSVAKKIKNGARKIVLDKAEEARVAAFSAFKSLGYSVPQFAPPILSAAASDSIRKEAGSPSGSDTADTSHSAVAADHINNSNKVPLVKERDDLVKSPDNAPLAPVDGKLGSEMPYSFSTEKSAVPVVGPTRNELKATFNLTRNSDMTTVSIQLQKTNDKTSILDGCHARGIEEHQSGNLASGNGVSSSQRGPINAVSSLGGLDQFLDLWDTISEFYFDIHYIKRMELHSAAPFEIHGMAICWEGSPVYYINLPRDILLSDNRKDGCLPLSGHSPKLKVSSSNSKEALEIAMHRWSRISKILGNKNVRKFAWNLKIQIQVLKKPAVSVQRFGCLDNLGDTVDLEIVDNSYVLLPHIHVKDAIDMCVVAWILWPDEESSSKPNLDKEVKKRLSAEDAATATQSGRWRNQMRKAAHNGCCRRVAQTRALCSVLWKLLVSEKLVEVLMGIEIPLLNVLADMELWGIGVDLERCIQARKLLVKRLRYLENEAYKLAGIKFSLSMPADIAKVLFEHLKLPIPDGRNKGKQHPSTDKHCLDALRHEHPIVPVIKEHRTLAKLLNATLGSICSLARLSVSTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVEFKMNEDKNGGDTDDSCCTINARDFFVPTQDNWLLLTADYSQIELRLMAHFSKDPSLIELLSKPDGDVFTMIASRWIGCPEASVGSHDRDLTKKMVYGILYGMGPNSLAEQLDCTSDEAAEKIRNFKRTFPGVASWLLEAVASCRNKG* |
ORF Type | complete |
Blastp | Helicase and polymerase-containing protein TEBICHI from Arabidopsis with 58.99% of identity |
---|---|
Blastx | Helicase and polymerase-containing protein TEBICHI from Arabidopsis with 58.99% of identity |
Eggnog | DNA polymerase(COG0749) |
Kegg | Link to kegg annotations (AT4G32700) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447493.1) |
Pfam | DEAD/DEAH box helicase (PF00270.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer