Protein coding transcript 219935

TranscriptLl_transcript_189031
CDS coordinates158-1183 (+)
Peptide sequenceMGASVRAIPTSFSTINTWDYSNGFAKSMDFVRVSDMNKVQCGKTKRVLVIRNSSNPAQDIVQLQPASPGSSLLVPRQKYCESLNQTIRRKTRTVKVGEVCIGSEHPIRVQTMTTTDTKDVAGTVEQVMRIADRGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPAIALRVAECFDKIRVNPGNFADRRAQFEQLEYTEEDYQKELEHIEQVFTPLVEKCKKYGRAMRIGTNHGSLSDRTMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRTLLAEMLVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQVCI*
ORF Typecomplete

Annotations of Ll_transcript_189031

Blastp4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic from Arabidopsis with 79.15% of identity
Blastx4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic from Arabidopsis with 73.44% of identity
Eggnog4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity(COG0821)
KeggLink to kegg annotations (AT5G60600)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019447881.1)
PfamGcpE protein (PF04551.13)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;


Loading content...

Grab and slide to change sequence position

Alignmet by MSA Viewer