Transcript | Ll_transcript_189031 |
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CDS coordinates | 158-1183 (+) |
Peptide sequence | MGASVRAIPTSFSTINTWDYSNGFAKSMDFVRVSDMNKVQCGKTKRVLVIRNSSNPAQDIVQLQPASPGSSLLVPRQKYCESLNQTIRRKTRTVKVGEVCIGSEHPIRVQTMTTTDTKDVAGTVEQVMRIADRGADLVRITVQGKREADACFEIKNTLVQKNYNIPLVADIHFAPAIALRVAECFDKIRVNPGNFADRRAQFEQLEYTEEDYQKELEHIEQVFTPLVEKCKKYGRAMRIGTNHGSLSDRTMSYYGDSPRGMVESAFEFARICRKLDFHNFVFSMKASNPVIMVQAYRTLLAEMLVQGWDYPLHLGVTEAGEGEDGRMKSAIGIGTLLQVCI* |
ORF Type | complete |
Blastp | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic from Arabidopsis with 79.15% of identity |
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Blastx | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic from Arabidopsis with 73.44% of identity |
Eggnog | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity(COG0821) |
Kegg | Link to kegg annotations (AT5G60600) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447881.1) |
Pfam | GcpE protein (PF04551.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer