ta-siRNA 220 details

ID220
SequenceAACGACAAGCTCTTCATCTCCAAC 

Targets of siRNA 220

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details
Ll_transcript_200773; 48 71 GTTGAAGATGAAGAGCTTGTCGTT BLAST
Ll_transcript_78052; 209 232 ATCGGAGATGAAGAGCTTGTCGTT BLAST
Ll_transcript_124331; 211 234 TTTGAAGATGAAGAGCTTGTCGTT BLAST
Ll_transcript_51769; 313 336 TTTGGAGATAAAGAGCTTGTCGTT BLAST
Ll_transcript_51782; 313 336 TTTGGAGATAAAGAGCTTGTCGTT BLAST
Ll_transcript_124328; 26 49 TTTGGAGATAAAGAGCTTGTCGTT BLAST
Ll_transcript_15824; 178 201 ATTGAAGATAAAGAGCTTGTCGTT BLAST
Ll_transcript_15821; 209 232 ATTGAAGATAAAGAGCTTGTCGTT BLAST
Ll_transcript_13558; 154 177 GTTGGAGATGAAGAACTTGTCGTT BLAST
Ll_transcript_126375; 176 199 GTTGAAGATGAAGAGATTGTCGTT BLAST
Ll_transcript_126361; 176 199 GTTGAAGATGAAGAGATTGTCGTT BLAST
Ll_transcript_76431; 177 200 GTTGGATATGAAGAGCATGTCGTT BLAST
Ll_transcript_486343; 286 309 GTTGAAGATGAAGAGCTTGTCGTT BLAST
Ll_transcript_486366; 187 210 ATCGGAGATGAAGAGCTTGTCGTT BLAST
Ll_transcript_486354; 179 202 ATTGAAGATGAAGAGCTTGTCGTT BLAST
Ll_transcript_481469; 267 290 TTTGAAGATGAAGAGCTTGTCGTT BLAST
Ll_transcript_471739; 23 46 TTTGAAGATGAAGAGCTTGTCGTT BLAST
Ll_transcript_481483; 201 224 GTTGAAGATAAAGAGCTTGTCGTT BLAST
Ll_transcript_481497; 201 224 GTTGAAGATAAAGAGCTTGTCGTT BLAST
Ll_transcript_481485; 201 224 GTTGAAGATAAAGAGCTTGTCGTT BLAST
Ll_transcript_298297; 142 165 ATTGAAGATAAAGAGCTTGTCGTT BLAST
Ll_transcript_298311; 214 237 ATTGAAGATAAAGAGCTTGTCGTT BLAST
Ll_transcript_387858; 276 299 GTTGGAGATGAAGAACTTGTCGTT BLAST
Ll_transcript_415803; 122 145 GTTGAAGATGAAGAGTTTGTCGTT BLAST
Ll_transcript_377710; 201 224 GTTCGAGATGAAGAGTTTGTCGTT BLAST
Ll_transcript_377697; 201 224 GTTCGAGATGAAGAGTTTGTCGTT BLAST
Ll_transcript_518177; 155 178 GTTGAAGATGAAGAGATTGTCGTT BLAST
Ll_transcript_377692; 72 95 GTTGAAGATGAAAAGCTTGTCGTT BLAST
Ll_transcript_486363; 179 202 GTTGGAGATAAAGAGCTCGTCGTT BLAST
Ll_transcript_61062; 1520 1549 GTTGGAGGTGGGTGGCAGGGGCTTGTGGCT BLAST

Expression of siRNA 220


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)