Transcript | Ll_transcript_190819 |
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CDS coordinates | 135-1883 (+) |
Peptide sequence | MASSSDNASRSSSSAADSYIGCLISLTSKSEIRYEGVLYNINTDESSIGLRNVRSFGTEGRKKDGPQIPPGDKVYEYILFRGTDIKDLQVKSSPPVHPTPPVNTDPAIIQSQYSRPVTTTSSLPAVPHDAQLGLHGSNFQAPLPLYQPGRSWGASPPAPNANDGGLAMPMYWQGYYGAPYGLPQLQQQSLLRPPHDLPMPSSMQQSMQYPNFNSSLPNGPSHLPDIPSSLLPVSTISHSVSTSMPPSNLPITLTPAPSATLAPETLPVSEPNKAPTVSFSAVSLPANLPSLTPFSNDSLDIGAVLPSVNKSAAISGSSLPYQTVPQTTPAIVGSSNSIRTETSAPSLVTPGQLLQSRPAVASSSQPLQTSHKDVEVIQVSATLRPEASVPVSAETQPPILQLPVNSRPSHRPGGAPTQTHHGYGYRGRGRGRGVQGICPVVRFAEDFDFMAMNEKFNKDEVWGHLGKSKQPNEKDGEEIASDEYGSEDEGGGHVSKLDAKPVYRKDDFFDSLSSNTLDRDSQNGRIRYSEQIKIDTETFGEFSRHRGGWGGRGQWRGGHARGGYYGRGYGYGGRGRGRGGRG* |
ORF Type | complete |
Blastp | Protein decapping 5 from Arabidopsis with 54.26% of identity |
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Blastx | Protein decapping 5 from Arabidopsis with 53.31% of identity |
Eggnog | LSM14A, SCD6 homolog A (S. cerevisiae)(ENOG41122RA) |
Kegg | Link to kegg annotations (AT1G26110) |
CantataDB | Link to cantataDB annotations (CNT0001887) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461657.1) |
Pfam | Ataxin 2 SM domain (PF14438.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer