Protein coding transcript 220351

• Transcript: Ll_transcript_187784
• CDS coordinates: 80-4081 (+)
• Peptide sequence: MADKFVQPAIPKFDGHYNHWSMMMENFLRSKELWNLIEEGIPVIGATSSSEAQRKAVEEAKLKDLKVKNFLFQAIDREILETILDKGTSKAIWMSMKQKYQGSTKVKRAQLQALRREFELLTMKEGERIDSFLGRTLGVVNKMKSNGENMAQDMVVSKVLRSLTPKYNYVVCSIEESNDLSTLTIDELHGSLLVHEQRMQEYQEEEQVLKVTHDDKTRRGGRTLFRDGRGRGRGRRSLNKAIVECYKCHKLGHLQYECPEWEKKANYVEEEEAEEELLLMSHMDQQPTRQEEAWFLDSGCSNHMTGNKGWFTNLEEGLSQTVKLGNNMTMKVVAKGSVRMQVNGVTQVITDVYFVPELKNNLLSLGQLQEKGLTILIQNGVCKIFHSKRGLIMQTSMSGNRMFYISATVAPKETMCLQMELKKEKEVHLWHCRFGHLNYKGLNTLSQKQMVADLPNLKFSKKTCITCLTGKQHRRSIQKKSMWRASRKLQLVHADICGPIQPSSNSNKRYILSFIDDFTRKTWIYLLHEKSEAFQHFKNYKMSVEKEVDGHIACLRTDRGGEFTSYEFAEFCKTQGVKRQLTAAYTPQQNGVAERKNRTIMNGVRAVLKERQVPKIFWAEAAKWCVHVQNRSPTSAIKNTTPEEAWSNVKPAVGYFRVFGSVAHVHVPDQRRTKLEDKSKMCIFLGISDESKAYKLFDPISKKIIVSRDVVFEEDRSWDWGKTDEERKADLLICEGEEENLDEEETDEEEEVHEQEENEEGGSSSNEITASSREENGTDQESLDQGRAKRTTKEPAWMSDYVTGTDLAEEELMMLMTASESDPLSFQEAYKSSKWQEAMQNEIKAIEKNGTWELTDLPKGVKPIGVKWIYKTKLNESGEVERYKARLVAKGYAQRYGIDYNEVFAPVARLDTVRLILALAAQHEWEIFQLDVKSAFLHGELKEEIFTDQPEGFIKKGEEDKVYKLKKALYGLKQAPRAWYSKIEAYFMREGFEKCSSEHTLFTKKEGGNILIVSLYVDDLIFTGGNRSMCDKFKSSMMREFDMSDLGRMKHFLGIEVIQNKDGIFICQRRYAREVLERFNMGSCNAVKNPIVPGTELSKDEEGDGVDITMFKQAVGSLMYLTATRPDLIYGVSLISRFMANPKSSHWLATKRIFRYIKGTTDFGILYKKNSRNAGLVCYTDSNYAGDLDDRKSTSGFAFIMGSGAISWASKKQPVVSLSTTEAEYIAASLCACQCVWLRRILEQLGAEEKESTEIYCDNNSTIQLSKNPVFHGRSKHIGVRFHFLRDLVNDGIIKLSFCNSEEQVADLMTKPLKVDQFVHFREMLGVVDATDI*
• ORF Type: complete

Annotations of Ll_transcript_187784

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 33.31% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 32.92% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020987654.1)
• Pfam: gag-polypeptide of LTR copia-type (PF14223.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;