Transcript | Ll_transcript_189154 |
---|---|
CDS coordinates | 151-3057 (+) |
Peptide sequence | MDAKLNGPTVSLSSTGGIAVTTSSSSTLQPNYSSRLVQETLNHLATIDLIELCKEAKVECCRATRDLRSCGRYVHHVLNSCGHASLCEECSQRCDNCPICRIPIPQTGARLRLRLYYECIEAGLISRRCDDGFEEIEDGEKQLTADVQCLYSLFDVALENNMVSLICHYITDVCMDETAVSCDPVVAFLLDEVVVKDWCKRTFKNILTELHGIYNLDVLGMKGRLSSLMKFPLYFRGITNVLEILESSFKGTLSAQLHDLHHLHESILKAKQHLEIIIWCTRHHFLEDVESRFTDISSWASVVHKRKSEAIRRAWPDAINQSVESTGHIGSLFIEDALNSLDLEESLVQEIEGGLQVSSLQMDGTLSFRSKTDQVLSCYPFKNLRTAADLLFLHGSSDTVIAKQAIFLYYLYDRHWTIPDEQWRHIVEDFAATFSISRHSLLESLTFYLLDDHTEEALQEACRLLPEMSGPVSHPKIAEVLLERGSPDTALMVLRWTGRDSGPHMISLRDAVTAVRVRVECGLLTEAFMHQRILWTRVKEKHLNKGAFGGTSDKLKDQCSNWVEWVEALVTEICCLCIRRNLADRMLELPWNSDEEIYIHKCLLDYAIEDPRRTTGSLLVVFYIQRYRYSEAYQVHVRLEKIEQDTISKGSISEEFLPRLETAVRWRANLVNRCLELLPDIEQQKVRSGILTEDAGTFHEEIEIPAKFDVPPIHDSRSTSLLIPSSANSSSLLQNNHTNGLLSSSTLGTSTKLGISFPTTGPELGNIRSPSYHHEGLITSNERVPNNRGKIGKILRYDNTPTPRSRKIRLMNDSPLKGVNRTSPSSFQENKVDKILPGVEQNLFSGFYQSTPHPPTYSGMAIANPDTRSGRSSSKEFANDLPNMSSWNVQAHTNDRSWNVESINDPMEVSLSHMEKKLDIGENINGGPRWRSDETSDEDEEQGLEKAMDKAHHATPTRTTRRSRFAMR* |
ORF Type | complete |
Blastp | E3 ubiquitin-protein ligase HOS1 from Arabidopsis with 49.84% of identity |
---|---|
Blastx | E3 ubiquitin-protein ligase HOS1 from Arabidopsis with 49.3% of identity |
Eggnog | e3 ubiquitin-protein ligase(ENOG4110YTD) |
Kegg | Link to kegg annotations (AT2G39810) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421505.1) |
Pfam | Nuclear pore complex assembly (PF13934.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer