Transcript | Ll_transcript_173203 |
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CDS coordinates | 336-1487 (+) |
Peptide sequence | MDEFLEGAYERFVVKKEGTAKQRKRVKKSYDAGKELLEGGEDDVQPKYDSDEDLAVQEANPLVVPLNDGTGPTQEEITNRWFSQDVFAEAAEEGDFEKQESEDEMDIDGHKDKKSTTTAVKEKKSILKKAKENKTEAPAAVVIDKPQSQASKADDDFEIVPAPGTDSSDDSSSESEDDDIETKAEVLACARKMLRKKQRELMLDDAYNKYMFDDEGLPKWFLDEEKRHRIPVKPVTKEEIAAMKAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKATAISDQTEISDRSKSKQIEKLYKKATAPQRTKKEYVVAKKGVQVKTGKGKVLVDRRMKKDARTRGMGKSGKGGPKSKGKGGKGSKGKTASKGSAKKGGRKGNK* |
ORF Type | complete |
Blastp | pre-rRNA processing protein FTSJ3 from Pongo with 34.83% of identity |
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Blastx | Putative rRNA methyltransferase from Dictyostelium with 44.72% of identity |
Eggnog | Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit (By similarity)(COG0293) |
Kegg | Link to kegg annotations (100172587) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413490.1) |
Pfam | Spb1 C-terminal domain (PF07780.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer