ta-siRNA 227 details

ID227
SequenceAAGATTCGATTGTAGTATAGTAT 

Targets of siRNA 227

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_183748; 177 199 ATACTATACTACAATCGAATCTT BLAST
Ll_transcript_163299; 389 411 ATACTATACTACAATCGAATCTT BLAST
Ll_transcript_163302; 389 411 ATACTATACTACAATCGAATCTT BLAST
Ll_transcript_260384; 129 151 ATAGTATACTACAATCGAATCTT BLAST
Ll_transcript_260370; 265 287 ATAGTATACTACAATCGAATCTT BLAST
Ll_transcript_260375; 265 287 ATAGTATACTACAATCGAATCTT BLAST
Ll_transcript_114104; 111 133 ATACTATACCACAATCGAATCTT BLAST
Ll_transcript_114109; 127 149 ATACTATACCACAATCGAATCTT BLAST
Ll_transcript_114111; 127 149 ATACTATACCACAATCGAATCTT BLAST
Ll_transcript_114113; 127 149 ATACTATACCACAATCGAATCTT BLAST
Ll_transcript_114115; 127 149 ATACTATACCACAATCGAATCTT BLAST
Ll_transcript_114105; 127 149 ATACTATACCACAATCGAATCTT BLAST
Ll_transcript_114099; 127 149 ATACTATACCACAATCGAATCTT BLAST
Ll_transcript_114102; 127 149 ATACTATACCACAATCGAATCTT BLAST
Ll_transcript_114094; 127 149 ATACTATACCACAATCGAATCTT BLAST
Ll_transcript_114096; 127 149 ATACTATACCACAATCGAATCTT BLAST
Ll_transcript_114098; 127 149 ATACTATACCACAATCGAATCTT BLAST
Ll_transcript_114106; 127 149 ATACTATACCACAATCGAATCTT BLAST
Ll_transcript_114095; 127 149 ATACTATACCACAATCGAATCTT BLAST
Ll_transcript_260366; 520 542 ATACTATACTACAATTGAATCTT BLAST
Ll_transcript_10583; 643 665 ATACTATACTACAATTGAATCTT BLAST
Ll_transcript_10572; 799 821 ATATTATACTACAATTGAATCTT BLAST
Ll_transcript_114101; 7 29 ATACTATACTACAATCGACTCTT BLAST
Ll_transcript_114103; 7 29 ATACTATACTACAATCGACTCTT BLAST
Ll_transcript_163298; 64 86 ACACTATACTACAATTGAATCTT BLAST
Ll_transcript_260391; 319 341 ACACTATACTACAATTGAATCTT BLAST
Ll_transcript_92003; 54 76 ATACTGTACTACAATTGAATCTT BLAST
Ll_transcript_47660; 53 75 ATACTATATTACAATTGAATCTT BLAST
Ll_transcript_273218; 246 268 ATACTATACTACAATTGAATCTC BLAST
Ll_transcript_273216; 840 862 ATACTATACTACAATTGAATCTC BLAST
Ll_transcript_260388; 278 300 ATAATATATTACAATTGAATCTT BLAST
Ll_transcript_150395; 1 20 CTATACTACAATTGAATCTC BLAST
Ll_transcript_370425; 88 110 ATACTATACTACAATCGAATCTT BLAST
Ll_transcript_511791; 30 52 ATACTATACTACAATCGAATCTT BLAST
Ll_transcript_437365; 413 435 ATACTATACTACAATCGAATCTT BLAST
Ll_transcript_491199; 27 49 ATATTATACTACAATCGAATCTT BLAST
Ll_transcript_491198; 27 49 ATATTATACTACAATCGAATCTT BLAST
Ll_transcript_479167; 179 201 ATAGTATACTACAATCGAATCTT BLAST
Ll_transcript_511776; 48 70 ATACTATACCACAATCGAATCTT BLAST
Ll_transcript_479192; 118 140 ATACTATACTACAATTGAATCTT BLAST
Ll_transcript_479188; 118 140 ATACTATACTACAATTGAATCTT BLAST
Ll_transcript_424602; 259 281 ATACTATACTACAATTGAATCTT BLAST
Ll_transcript_458295; 194 216 ATACTATACTACAATTGAATCTT BLAST
Ll_transcript_458289; 289 311 ATACTATACTACAATTGAATCTT BLAST
Ll_transcript_442329; 26 48 ATATTATACTACAATTGAATCTT BLAST
Ll_transcript_370409; 7 29 ATACTATACTACAATCGACTCTT BLAST
Ll_transcript_437371; 323 345 ACACTATACTACAATTGAATCTT BLAST
Ll_transcript_437364; 379 401 ACACTATACTACAATTGAATCTT BLAST
Ll_transcript_493389; 459 481 ATACTGTACTACAATTGAATCTT BLAST
Ll_transcript_511786; 246 268 ATACTATACTACAATTGAATCTC BLAST
Ll_transcript_453830; 52 74 ATACTATACTACAATTGAATCTC BLAST
Ll_transcript_511788; 566 588 ATACTATACTACAATTGAATCTC BLAST
Ll_transcript_511790; 840 862 ATACTATACTACAATTGAATCTC BLAST
Ll_transcript_457950; 382 404 ATAATATATTACAATTGAATCTT BLAST
Ll_transcript_479170; 236 258 ATAATATATTACAATTGAATCTT BLAST
Ll_transcript_71830; 376 398 TTGCTATGCTACCATTGAATCTG BLAST
Ll_transcript_327537; 388 410 TTGCTATGCTACCATTGAATCTG BLAST

Expression of siRNA 227


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)