Transcript | Ll_transcript_366140 |
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CDS coordinates | 293-2953 (+) |
Peptide sequence | MQVSYSSMNSWLKTRVPLEPCSTTSTTLFTPISYSTCINVLHSPQYKNNNCVSFLVSQRKGFTTLTPVSPMKKMSRKRRFFTVSALFERFTERAIKAIMFSQREAKSLGSDLVYTQHLLLGLISEEDRSLDGFLSSGVTIDKARDAVRSIWHQNDNSTSGDGDGDDDGRRSYVSASHIPFSISSKRVFEAAVEYSKSLGHKFIAPEHILVALVKVDDGSATRVLYRLGTNASQLAVVAFSRLQKEIAKDGREPNMVSNGVHNKSVSRKGSDAGSSATTKEMSALSQFCVDLTERASEGLVDPVIGREVEVQRIIQILGRKTKSNPILLGESGVGKTAIAEGLAIHIARADIAPFLLTKRIMSLDVAMLMAGAKERGELEERVTKLIKEIIKSGDVILFIDEVHTLVQSGTSGKGNKGSGLDISNLLKPALGRGQFQCIASTTIDEYRLHFEKDKALARRFQPVWVDEPSEDDAVKILMGLREKYEAHHKCRFTEDAIKAAVNLSSRYICDRYLPDKAIDLIDEAGSRAHIDDFKRKKELDNCVLLKSPTDYWQEIRDVQAMHEMESKLKYYGTSSIDDTSELIVDSYLPSEANDNEPVVVGPEDIATVASIWSGIPVQQLSVDQRTLLLDLNNQLRKRVIGQDEAVLAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELAKSLAACYFGSEAAMIRLDMSEYMERHTVSKLIGSPPGYVGYGEGGILTEAIRRKPFTLLLLDEIEKAHPDIFNILLQLLEDGQLTDSQGRKVSFKNALVVMTSNVGSSAISKGRHNSIGFLISDDKSTSYNGMKSMVMEELRTYFRPELLNRIDEVVVFKPLEKSQLLQILDMLLQDLKKRVMTLGIDLKVSESVKNLVCQQG |
ORF Type | 3prime_partial |
Blastp | Chaperone protein ClpD, chloroplastic from Arabidopsis with 68.51% of identity |
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Blastx | Chaperone protein ClpD, chloroplastic from Arabidopsis with 68.39% of identity |
Eggnog | ATP-dependent CLP protease ATP-binding subunit(COG0542) |
Kegg | Link to kegg annotations (AT5G51070) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429737.1) |
Pfam | Clp amino terminal domain, pathogenicity island component (PF02861.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer