Protein coding transcript 228994

• Transcript: Ll_transcript_53640
• CDS coordinates: 1789-5868 (+)
• Peptide sequence: MATSQGLAMNLPILDGRNYNHWCVQMKAIFTFQECIDVVKAGIQERDENSVEFREAMKRDSKAIFLIHQCVDTANFEKISSASSSKEAWEILEQCYTGNLKIKKVKLQTLRRQYELLQMDEDEEIGDYLTRIRTLTNLMKGCGKKISEKSIVEKVLRTLSSRFDNIVVAIEESKDIEALKVEELQSSLEAHEQRFIERQANRQNQQALSAQFRVKKGSSQVIKSKEKGKWKVDAESVRSKGSKFQKTSTCKTSQESEAARSKKSTTQLVGGKKKDKSKIQCFNCRNWGHYASECKAKKSVNAKEEEARLAKGDTSESEEDVLLLALKESSDDALLMVREHCDQGTNTWYLDTGCSNHMTGNKDWFESLDNSIHTKIKFADDSVINAEGVGRVLIKKRDGSSSYIKDVLYVPKMKSNLLSLGQLLEKGYIMRMEDKLLKVFNNKGSLILKAPLSQNRTFKIGIQKGNHQCLESVIDENWLWHQRLGHLNFKSLEHLSKDGLVDGLPMIRTPTSLCEECITSKQTRNSFSTNIPTKSTKHLEIVYTDVCGPFEVDSLGGSKYFLTFKDDFTRKLWVYLLKKKSEVFSKFKSFKALVENQCGRKLSLLRSDGGGEYTSHEFHEFCETEGVTHEIIAPYTPQHNGAAERVNRTILDMARSMLKTKRLPKNLWAEAVSTAAYILNRCPTKRLKDKTPEEAWTGLKPSIKHLRVFGSVCYKHTPDFKRQKLDDKGVKLVLLGYHSSGAYKVLDPETKVISFSRDLKFDETQVWDWTAQVRAASIRQVVMPIVESQNSEDSNAISESNARVTERPQRQRNLPLRLRDYEVFEDSEITQEGDLVHMALLAEVEPISFDEAVKDVCWIEAMKEEISSIEKNCTWQLTTLPKGKKAIAVKWVYKVKLRPDGTISKYKARLVAKGFLQKPGLDFDEVYAPVARMETVRLVIAIASAKGWPICQMDVKSAFLNGPLDKEVFVKQPPGFEVADQTQKVYKLQKALYGLKQAPRAWNRRIDSFLTQLGFSKCIIEHGIYTKDIGSETQIIICLYVDDLLITGSMESEIEWLKSKLNLEFEMSDLGALAYFLGIEFARTEAGILMHQRKYISDVLGRFEMLECNPASTPVEVGHNLSINNSDEQLIESTPYRQVIGSLRYICNSRPDLAFGVGLVSRFMEKPAHSHMQAVKRILRYLKSSLDYGVLFPANSGNHSIYGYSDADWSGDRDDRKSTSGYLFKYGEAVVSWCSRKQNSVALSSCEAEYVAACLGAQQALWLQTLGTELGVQKEEKMVLFVDNKSAINLAKNPISHGRSKHIETKYHFLRDQVEKGNLHLEFCRSKDQQADLLTKALKGEAFQEQRKQLGVISLTSMN*
• ORF Type: complete

Annotations of Ll_transcript_53640

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 33.76% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 34.96% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020987654.1)
• Pfam: gag-polypeptide of LTR copia-type (PF14223.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;