Protein coding transcript 228997

• Transcript: Ll_transcript_53644
• CDS coordinates: 2-2788 (+)
• Peptide sequence: EDVLLLTLKEEPSLENDNADDTLLMVTTQCEQRSNTSYIDTGCSNHMTGNKDWFESLDNLVHTKIKFADDSVINAEGVGRVLIKKRDGSSSYIKDVLYVPKMKSNLLSLGQLLEKGYIMRMEDKLLKVFNNKGSLILKAPLSQNRTFKIGIQKGNHQCLESVIDENWLWHQRLGHLNFKSLEHLSKDGLVDGLPMIRTPTSLCEECITSKQTRNSFSTNIPTKSTKHLEIVYTDVCGPFEVDSLGGSKYFLTFKDDFTRKLWVYLLKKKSEVFSKFKSFKALVENQCGRKLSLLRSDGGGEYTSHEFHEFCETEGVTHEIIAPYTPQHNGAAERVNRTILDMARSMLKTKRLPKNLWAEAVSTAAYILNRCPTKRLKDKTPEEAWTGLKPSIKHLRVFGSVCYKHTPDFKRQKLDDKGVKLVLLGYHSSGAYKVLDPETKVISFSRDLKFDETQVWDWTAQVRAASIRQVVMPIVESQNSEDSNAISESNARVTERPQRQRNLPLRLRDYEVFEDSEITQEGDLVHMALLAEVEPISFDEAVKDVCWIEAMKEEISSIEKNCTWQLTTLPKGKKAIAVKWVYKVKLRPDGTISKYKARLVAKGFLQKPGLDFDEVYAPVARMETVRLVIAIASAKGWPICQMDVKSAFLNGPLDKEVFVKQPPGFEVADQTQKVYKLQKALYGLKQAPRAWNRRIDSFLTQLGFSKCIIEHGIYTKDIGSETQIIICLYVDDLLITGSMESEIEWLKSKLNLEFEMSDLGALAYFLGIEFARTEAGILMHQRKYISDVLGRFEMLECNPASTPVEVGHNLSINNSDEQLIESTPYRQVIGSLRYICNSRPDLAFGVGLVSRFMEKPAHSHMQAVKRILRYLKSSLDYGVLFPANSGNHSIYGYSDADWSGDRDDRKSTSGYLFKYGEAVVSWCSRKQNS
• ORF Type: internal

Annotations of Ll_transcript_53644

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 38.05% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 38.36% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020987654.1)
• Pfam: GAG-pre-integrase domain (PF13976.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;