Protein coding transcript 228999

• Transcript: Ll_transcript_53646
• CDS coordinates: 592-4317 (+)
• Peptide sequence: MATSQGLAMNLPILDGRNYNHWCVQMKAIFTFQECIDVVKAGIQERDENSVEFREAMKRDSKAIFLIHQCVDTANFEKISSASSSKEAWEILEQCYTGNLKIKKVKLQTLRRQYELLQMDEDEEIGDYLTRIRTLTNLMKGCGKKISEKSIVEKVLRTLSSRFDNIVVAIEESKDIEALKVEELQSSLEAHEQRFIERQANRQNQQALSAQFRVKKGSSQVIKSKEKGKWKVDAESVRSKGSKFQKTSTCKTSQESEAARSKKSTTQLVGGKKKDKSKIQCFNCRNWGHYASECKAKKSVNAKEEEARLAKGDTSESEEDVLLLALKESSDDALLMVREHCDQGTNTWYLDTGCSNHMTGNKDWFESLDNSIHTKIKFADDSVINAEGVGRVLIKKRDGSSSYIKDVLYVPKMKSNLLSLGQLLEKGYIMRMEDKLLKVFNNKGSLILKAPLSQNRTFKIGIQKGNHQCLESVIDENWLWHQRLGHLNFKSLEHLSKDGLVDGLPMIRTPTSLCEECITSKQTRNSFSTNIPTKSTKHLEIVYTDVCGPFEVDSLGGSKYFLTFKDDFTRKLWVYLLKKKSEVFSKFKSFKALVENQCGRKLSLLRSDGGGEYTSHEFHEFCETEGVTHEIIAPYTPQHNGAAERVNRTILDMARSMLKTKRLPKNLWAEAVSTAAYILNRCPTKRLKDKTPEEAWTGLKPSIKHLRVFGSVCYKHTPDFKRQKLDDKGVKLVLLGYHSSGAYKVLDPETKVISFSRDLKFDETQVWDWTAQVRAASIRQVVMPIVESQNSEDSNAISESNARVTERPQRQRNLPLRLRDYEVFEDSEITQEGDLVHMALLAEVEPISFDEAVKDVCWIEAMKEEISSIEKNCTWQLTTLPKGKKAIAVKWVYKVKLRPDGTISKYKARLVAKGFLQKPGLDFDEVYAPVARMETVRLVIAIASAKGWPICQMDVKSAFLNGPLDKEVFVKQPPGFEVADQTQKVYKLQKALYGLKQAPRAWNRRIDSFLTQLGFSKCIIEHGIYTKDIGSETQIIICLYVDDLLITGSMESEIEWLKSKLNLEFEMSDLGALAYFLGIEFARTEAGILMHQRKYISDVLGRFEMLECNPASTPVEVGHNLSINNSDEQLIESTPYRQVIGSLRYICNSRPDLAFGVGLVSRFMEKPAHSHMQAVKRILRYLKGSLDFGVLLPTSSGQENHSIYGYSDADWSGDRDDRKSTSGYLFKYGEAVVSWCSRKQNS
• ORF Type: 3prime_partial

Annotations of Ll_transcript_53646

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 33.7% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 35% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020987654.1)
• Pfam: gag-polypeptide of LTR copia-type (PF14223.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;