miRNA 230 details

Id Micro230
SequenceTCCCAAATGTAGACAAAGC 
Annotated namesaly-miR158b-3p; 
Annotated pre-miRNANone

Targets of miRNA 230

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_150692; FTRINITY_DN57639_c1_g3_i7 664 682 GCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150689; FTRINITY_DN57639_c1_g3_i5 763 781 GCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150684; FTRINITY_DN57639_c1_g3_i3 664 682 GCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150702; FTRINITY_DN57639_c1_g3_i11 763 781 GCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150690; FTRINITY_DN57639_c1_g3_i6 664 682 GCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150705; FTRINITY_DN57639_c1_g3_i12 763 781 GCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150700; FTRINITY_DN57639_c1_g3_i10 664 682 GCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150688; FTRINITY_DN57639_c1_g3_i4 763 781 GCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_77940; FTRINITY_DN67871_c0_g1_i1 841 859 TCTTTTTCTACGTTTGGGA BLAST psRNATarget
Ll_transcript_107560; FTRINITY_DN47061_c0_g1_i1 1276 1294 GCACTGTTTACATTTGGGA BLAST psRNATarget
Ll_transcript_266715; FTRINITY_DN55840_c6_g5_i1 817 835 ACTTTGTCTGCATTTGTGA BLAST psRNATarget
Ll_transcript_271774; FTRINITY_DN51006_c0_g1_i6 920 938 TTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_271772; FTRINITY_DN51006_c0_g1_i4 920 938 TTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_68725; FTRINITY_DN55043_c1_g1_i7 496 514 GCTTTGTTTGAGTTTGGGA BLAST psRNATarget
Ll_transcript_68720; FTRINITY_DN55043_c1_g1_i2 496 514 GCTTTGTTTGAGTTTGGGA BLAST psRNATarget
Ll_transcript_144529; FTRINITY_DN41169_c0_g1_i1 212 230 ATTTTTTCTGCATTTGGGA BLAST psRNATarget
Ll_transcript_253127; FTRINITY_DN52542_c0_g1_i4 358 376 GCTTTCTCTATATTTGTGA BLAST psRNATarget
Ll_transcript_225715; FTRINITY_DN56118_c2_g10_i1 344 362 GCTCTGTCTGCATTTGTGA BLAST psRNATarget
Ll_transcript_131470; FTRINITY_DN57536_c0_g1_i5 2626 2644 GCATTGTTTACATTTGGAA BLAST psRNATarget
Ll_transcript_165886; FTRINITY_DN80031_c0_g1_i1 122 140 GCTCTATCTACATTTGGGT BLAST psRNATarget
Ll_transcript_4556; FTRINITY_DN64480_c0_g1_i1 37 55 CCTTTGACTATGTTTGGGA BLAST psRNATarget
Ll_transcript_44810; FTRINITY_DN54135_c3_g1_i3 154 172 TTTTTGTTTACATTTGGTA BLAST psRNATarget
Ll_transcript_44811; FTRINITY_DN54135_c3_g1_i4 154 172 TTTTTGTTTACATTTGGTA BLAST psRNATarget
Ll_transcript_187822; FTRINITY_DN56709_c3_g1_i5 626 644 GTTTTGCTTATATTTGGGG BLAST psRNATarget
Ll_transcript_90006; FTRINITY_DN53946_c0_g1_i3 3580 3598 GCTTTGATTAAATTTGGGA BLAST psRNATarget
Ll_transcript_90004; FTRINITY_DN53946_c0_g1_i2 3580 3598 GCTTTGATTAAATTTGGGA BLAST psRNATarget
Ll_transcript_265547; FTRINITY_DN84926_c0_g1_i1 206 224 ACTGTGTTTACATTTGGGC BLAST psRNATarget
Ll_transcript_133585; FTRINITY_DN76828_c0_g1_i1 215 233 TCTTTTTTTATATTTGGGG BLAST psRNATarget
Ll_transcript_62116; FTRINITY_DN49005_c0_g1_i2 260 278 GTTTTTTTTGCATTTGGGC BLAST psRNATarget
Ll_transcript_209130; FTRINITY_DN52667_c0_g1_i9 355 373 TCTTTATCTACATTTGGTA BLAST psRNATarget
Ll_transcript_209129; FTRINITY_DN52667_c0_g1_i8 355 373 TCTTTATCTACATTTGGTA BLAST psRNATarget
Ll_transcript_209122; FTRINITY_DN52667_c0_g1_i1 355 373 TCTTTATCTACATTTGGTA BLAST psRNATarget
Ll_transcript_76819; FTRINITY_DN55525_c0_g1_i7 106 124 CCTTTTTCTATGTTTGGGG BLAST psRNATarget
Ll_transcript_3470; FTRINITY_DN50191_c0_g1_i1 104 122 GCTGTGTCTGTGTTTGGGT BLAST psRNATarget
Ll_transcript_3474; FTRINITY_DN50191_c0_g1_i5 104 122 GCTGTGTCTGTGTTTGGGT BLAST psRNATarget
Ll_transcript_50448; FTRINITY_DN58882_c0_g1_i4 136 154 GATTTGTCTGTATGTGGGA BLAST psRNATarget
Ll_transcript_67184; FTRINITY_DN55070_c2_g11_i1 271 289 GCTTTCTTTGTGTTTGGGG BLAST psRNATarget
Ll_transcript_199476; FTRINITY_DN49924_c1_g1_i1 883 901 GTTTTTTCTACAATTGGGG BLAST psRNATarget
Ll_transcript_168439; FTRINITY_DN57386_c2_g2_i4 1319 1337 GTTTTTTCTTTATTTGGGA BLAST psRNATarget
Ll_transcript_100711; FTRINITY_DN57175_c0_g1_i25 848 866 GCTATGTTTGCATTGGGGA BLAST psRNATarget
Ll_transcript_100715; FTRINITY_DN57175_c0_g1_i29 876 894 GCTATGTTTGCATTGGGGA BLAST psRNATarget
Ll_transcript_168433; FTRINITY_DN57386_c2_g2_i1 1415 1433 GTTTTTTCTTTATTTGGGA BLAST psRNATarget
Ll_transcript_100699; FTRINITY_DN57175_c0_g1_i14 1031 1049 GCTATGTTTGCATTGGGGA BLAST psRNATarget
Ll_transcript_100706; FTRINITY_DN57175_c0_g1_i21 1059 1077 GCTATGTTTGCATTGGGGA BLAST psRNATarget
Ll_transcript_150697; FTRINITY_DN57639_c1_g3_i9 224 242 GCTTTCTTTATATTTGGTA BLAST psRNATarget
Ll_transcript_168436; FTRINITY_DN57386_c2_g2_i3 2152 2170 GTTTTTTCTTTATTTGGGA BLAST psRNATarget
Ll_transcript_168435; FTRINITY_DN57386_c2_g2_i2 2248 2266 GTTTTTTCTTTATTTGGGA BLAST psRNATarget
Ll_transcript_301369; TRINITY_DN61190_c0_g1_i1 339 357 GTTTTGTCTACATTTTGGA BLAST psRNATarget
Ll_transcript_303959; TRINITY_DN48254_c3_g3_i1 417 435 GCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_303966; TRINITY_DN48254_c3_g3_i5 516 534 GCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_303969; TRINITY_DN48254_c3_g3_i7 417 435 GCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_303963; TRINITY_DN48254_c3_g3_i3 516 534 GCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_459065; TRINITY_DN38524_c0_g1_i2 533 551 TCTTTTTCTACGTTTGGGA BLAST psRNATarget
Ll_transcript_459064; TRINITY_DN38524_c0_g1_i1 1645 1663 TCTTTTTCTACGTTTGGGA BLAST psRNATarget
Ll_transcript_444759; TRINITY_DN40363_c0_g1_i1 1317 1335 GCACTGTTTACATTTGGGA BLAST psRNATarget
Ll_transcript_532105; TRINITY_DN50065_c5_g4_i1 378 396 ACTTTGTCTGCATTTGTGA BLAST psRNATarget
Ll_transcript_425256; TRINITY_DN43967_c0_g1_i1 878 896 TTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_425257; TRINITY_DN43967_c0_g1_i2 878 896 TTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_425258; TRINITY_DN43967_c0_g1_i3 878 896 TTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_425262; TRINITY_DN43967_c0_g1_i7 878 896 TTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_425259; TRINITY_DN43967_c0_g1_i4 878 896 TTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_458617; TRINITY_DN49907_c1_g1_i4 489 507 GCTTTGTTTGAGTTTGGGA BLAST psRNATarget
Ll_transcript_458620; TRINITY_DN49907_c1_g1_i6 496 514 GCTTTGTTTGAGTTTGGGA BLAST psRNATarget
Ll_transcript_513851; TRINITY_DN69218_c0_g1_i1 266 284 ATTTTTTCTGCATTTGGGA BLAST psRNATarget
Ll_transcript_421049; TRINITY_DN48751_c2_g1_i3 198 216 GCTTTCTCTATATTTGTGA BLAST psRNATarget
Ll_transcript_298494; TRINITY_DN51549_c4_g3_i1 264 282 GCTCTGTCTGCATTTGTGA BLAST psRNATarget
Ll_transcript_516963; TRINITY_DN51278_c0_g4_i5 2460 2478 GCATTGTTTACATTTGGAA BLAST psRNATarget
Ll_transcript_415069; TRINITY_DN49611_c1_g1_i1 69 87 GCTCTATCTACATTTGGGT BLAST psRNATarget
Ll_transcript_439247; TRINITY_DN48372_c8_g1_i1 93 111 CCTTTGACTATGTTTGGGA BLAST psRNATarget
Ll_transcript_442575; TRINITY_DN47865_c1_g1_i1 622 640 GTTTTGCTTATATTTGGGG BLAST psRNATarget
Ll_transcript_378228; TRINITY_DN50763_c2_g1_i3 3600 3618 GCTTTGATTAAATTTGGGA BLAST psRNATarget
Ll_transcript_378226; TRINITY_DN50763_c2_g1_i1 3600 3618 GCTTTGATTAAATTTGGGA BLAST psRNATarget
Ll_transcript_435705; TRINITY_DN48986_c2_g7_i1 324 342 ACTGTGTTTACATTTGGGC BLAST psRNATarget
Ll_transcript_422528; TRINITY_DN47905_c3_g2_i1 143 161 TCTTTTTTTATATTTGGGG BLAST psRNATarget
Ll_transcript_413455; TRINITY_DN45670_c0_g1_i4 105 123 TCTTTATCTACATTTGGTA BLAST psRNATarget
Ll_transcript_465461; TRINITY_DN52674_c2_g8_i1 30 48 ACATTGTTTATGTTTGGGA BLAST psRNATarget
Ll_transcript_422531; TRINITY_DN47905_c3_g2_i2 143 161 TCTTTTTTTATATTTGGGG BLAST psRNATarget
Ll_transcript_372000; TRINITY_DN47014_c0_g1_i2 237 255 GTTTTTTTTGCATTTGGGC BLAST psRNATarget
Ll_transcript_413461; TRINITY_DN45670_c0_g1_i10 105 123 TCTTTATCTACATTTGGTA BLAST psRNATarget
Ll_transcript_529155; TRINITY_DN51019_c2_g1_i1 304 322 GCTTTCTTTGTGTTTGGGG BLAST psRNATarget
Ll_transcript_293233; TRINITY_DN49124_c0_g4_i1 470 488 GTTGTGTCTACAATTGGGG BLAST psRNATarget
Ll_transcript_338939; TRINITY_DN48573_c4_g7_i2 137 155 GTTTTTTCTACAATTGGGG BLAST psRNATarget
Ll_transcript_309876; TRINITY_DN47104_c0_g1_i7 1160 1178 GTTTTTTCTTTATTTGGGA BLAST psRNATarget
Ll_transcript_460763; TRINITY_DN51141_c0_g3_i5 1164 1182 GCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_309874; TRINITY_DN47104_c0_g1_i5 1632 1650 GTTTTTTCTTTATTTGGGA BLAST psRNATarget
Ll_transcript_309872; TRINITY_DN47104_c0_g1_i4 1728 1746 GTTTTTTCTTTATTTGGGA BLAST psRNATarget
Ll_transcript_309870; TRINITY_DN47104_c0_g1_i3 1862 1880 GTTTTTTCTTTATTTGGGA BLAST psRNATarget
Ll_transcript_519479; TRINITY_DN51215_c0_g1_i4 859 877 GCTATGTTTGCATTGGGGA BLAST psRNATarget
Ll_transcript_519484; TRINITY_DN51215_c0_g1_i9 967 985 GCTATGTTTGCATTGGGGA BLAST psRNATarget
Ll_transcript_309868; TRINITY_DN47104_c0_g1_i1 2152 2170 GTTTTTTCTTTATTTGGGA BLAST psRNATarget
Ll_transcript_519480; TRINITY_DN51215_c0_g1_i5 859 877 GCTATGTTTGCATTGGGGA BLAST psRNATarget
Ll_transcript_519491; TRINITY_DN51215_c0_g1_i15 859 877 GCTATGTTTGCATTGGGGA BLAST psRNATarget
Ll_transcript_519492; TRINITY_DN51215_c0_g1_i16 859 877 GCTATGTTTGCATTGGGGA BLAST psRNATarget
Ll_transcript_303967; TRINITY_DN48254_c3_g3_i6 224 242 GCTTTCTTTATATTTGGTA BLAST psRNATarget
Ll_transcript_309878; TRINITY_DN47104_c0_g1_i8 2248 2266 GTTTTTTCTTTATTTGGGA BLAST psRNATarget
Ll_transcript_460759; TRINITY_DN51141_c0_g3_i4 1994 2012 GCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_519488; TRINITY_DN51215_c0_g1_i12 967 985 GCTATGTTTGCATTGGGGA BLAST psRNATarget
Ll_transcript_519495; TRINITY_DN51215_c0_g1_i19 967 985 GCTATGTTTGCATTGGGGA BLAST psRNATarget
Ll_transcript_519485; TRINITY_DN51215_c0_g1_i10 967 985 GCTATGTTTGCATTGGGGA BLAST psRNATarget
Ll_transcript_460772; TRINITY_DN51141_c0_g3_i9 1994 2012 GCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_460755; TRINITY_DN51141_c0_g3_i2 2274 2292 GCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_519503; TRINITY_DN51215_c0_g1_i27 859 877 GCTATGTTTGCATTGGGGA BLAST psRNATarget
Ll_transcript_519502; TRINITY_DN51215_c0_g1_i26 967 985 GCTATGTTTGCATTGGGGA BLAST psRNATarget
Ll_transcript_303976; TRINITY_DN48254_c3_g3_i8 224 242 GCTTTCTTTATATTTGGTA BLAST psRNATarget

Expression of miRNA 230


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)