miRNA 231 details

Id Micro231
SequenceTCCCAAATGTAGACAAAGCA 
Annotated namesaly-miR158a-3p; ath-miR158a-3p; 
Annotated pre-miRNANone

Targets of miRNA 231

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_150692; FTRINITY_DN57639_c1_g3_i7 663 682 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150689; FTRINITY_DN57639_c1_g3_i5 762 781 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150684; FTRINITY_DN57639_c1_g3_i3 663 682 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150702; FTRINITY_DN57639_c1_g3_i11 762 781 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150690; FTRINITY_DN57639_c1_g3_i6 663 682 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150705; FTRINITY_DN57639_c1_g3_i12 762 781 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150700; FTRINITY_DN57639_c1_g3_i10 663 682 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_150688; FTRINITY_DN57639_c1_g3_i4 762 781 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_77940; FTRINITY_DN67871_c0_g1_i1 840 859 ATCTTTTTCTACGTTTGGGA BLAST psRNATarget
Ll_transcript_107560; FTRINITY_DN47061_c0_g1_i1 1275 1294 AGCACTGTTTACATTTGGGA BLAST psRNATarget
Ll_transcript_68725; FTRINITY_DN55043_c1_g1_i7 495 514 TGCTTTGTTTGAGTTTGGGA BLAST psRNATarget
Ll_transcript_68720; FTRINITY_DN55043_c1_g1_i2 495 514 TGCTTTGTTTGAGTTTGGGA BLAST psRNATarget
Ll_transcript_253127; FTRINITY_DN52542_c0_g1_i4 357 376 TGCTTTCTCTATATTTGTGA BLAST psRNATarget
Ll_transcript_225715; FTRINITY_DN56118_c2_g10_i1 343 362 TGCTCTGTCTGCATTTGTGA BLAST psRNATarget
Ll_transcript_271774; FTRINITY_DN51006_c0_g1_i6 919 938 TTTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_271772; FTRINITY_DN51006_c0_g1_i4 919 938 TTTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_266715; FTRINITY_DN55840_c6_g5_i1 816 835 GACTTTGTCTGCATTTGTGA BLAST psRNATarget
Ll_transcript_144529; FTRINITY_DN41169_c0_g1_i1 211 230 AATTTTTTCTGCATTTGGGA BLAST psRNATarget
Ll_transcript_131470; FTRINITY_DN57536_c0_g1_i5 2625 2644 CGCATTGTTTACATTTGGAA BLAST psRNATarget
Ll_transcript_67184; FTRINITY_DN55070_c2_g11_i1 270 289 TGCTTTCTTTGTGTTTGGGG BLAST psRNATarget
Ll_transcript_199476; FTRINITY_DN49924_c1_g1_i1 882 901 TGTTTTTTCTACAATTGGGG BLAST psRNATarget
Ll_transcript_150697; FTRINITY_DN57639_c1_g3_i9 223 242 TGCTTTCTTTATATTTGGTA BLAST psRNATarget
Ll_transcript_150681; FTRINITY_DN57639_c1_g3_i1 223 242 TGCTTTCTTTATATTTGGTA BLAST psRNATarget
Ll_transcript_179085; FTRINITY_DN58617_c1_g2_i1 2223 2242 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_179107; FTRINITY_DN58617_c1_g2_i5 1163 1182 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_150683; FTRINITY_DN57639_c1_g3_i2 223 242 TGCTTTCTTTATATTTGGTA BLAST psRNATarget
Ll_transcript_150694; FTRINITY_DN57639_c1_g3_i8 223 242 TGCTTTCTTTATATTTGGTA BLAST psRNATarget
Ll_transcript_179111; FTRINITY_DN58617_c1_g2_i6 2223 2242 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_4556; FTRINITY_DN64480_c0_g1_i1 36 55 CCCTTTGACTATGTTTGGGA BLAST psRNATarget
Ll_transcript_44810; FTRINITY_DN54135_c3_g1_i3 153 172 GTTTTTGTTTACATTTGGTA BLAST psRNATarget
Ll_transcript_44811; FTRINITY_DN54135_c3_g1_i4 153 172 GTTTTTGTTTACATTTGGTA BLAST psRNATarget
Ll_transcript_187822; FTRINITY_DN56709_c3_g1_i5 625 644 CGTTTTGCTTATATTTGGGG BLAST psRNATarget
Ll_transcript_89580; FTRINITY_DN53923_c1_g1_i2 1033 1052 TGCTCCGTCTATATTTGGGC BLAST psRNATarget
Ll_transcript_89579; FTRINITY_DN53923_c1_g1_i1 1033 1052 TGCTCCGTCTATATTTGGGC BLAST psRNATarget
Ll_transcript_90006; FTRINITY_DN53946_c0_g1_i3 3579 3598 AGCTTTGATTAAATTTGGGA BLAST psRNATarget
Ll_transcript_90004; FTRINITY_DN53946_c0_g1_i2 3579 3598 AGCTTTGATTAAATTTGGGA BLAST psRNATarget
Ll_transcript_265547; FTRINITY_DN84926_c0_g1_i1 205 224 AACTGTGTTTACATTTGGGC BLAST psRNATarget
Ll_transcript_209130; FTRINITY_DN52667_c0_g1_i9 354 373 TTCTTTATCTACATTTGGTA BLAST psRNATarget
Ll_transcript_209129; FTRINITY_DN52667_c0_g1_i8 354 373 TTCTTTATCTACATTTGGTA BLAST psRNATarget
Ll_transcript_209122; FTRINITY_DN52667_c0_g1_i1 354 373 TTCTTTATCTACATTTGGTA BLAST psRNATarget
Ll_transcript_39592; FTRINITY_DN58964_c1_g1_i12 1290 1309 TGGTTTTTCTACATTTGGCA BLAST psRNATarget
Ll_transcript_39577; FTRINITY_DN58964_c1_g1_i4 1334 1353 TGGTTTTTCTACATTTGGCA BLAST psRNATarget
Ll_transcript_76819; FTRINITY_DN55525_c0_g1_i7 105 124 TCCTTTTTCTATGTTTGGGG BLAST psRNATarget
Ll_transcript_39584; FTRINITY_DN58964_c1_g1_i8 1658 1677 TGGTTTTTCTACATTTGGCA BLAST psRNATarget
Ll_transcript_303959; TRINITY_DN48254_c3_g3_i1 416 435 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_303966; TRINITY_DN48254_c3_g3_i5 515 534 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_303969; TRINITY_DN48254_c3_g3_i7 416 435 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_303963; TRINITY_DN48254_c3_g3_i3 515 534 TGCTTTCTTTATATTTGGGA BLAST psRNATarget
Ll_transcript_301369; TRINITY_DN61190_c0_g1_i1 338 357 GGTTTTGTCTACATTTTGGA BLAST psRNATarget
Ll_transcript_459065; TRINITY_DN38524_c0_g1_i2 532 551 ATCTTTTTCTACGTTTGGGA BLAST psRNATarget
Ll_transcript_459064; TRINITY_DN38524_c0_g1_i1 1644 1663 ATCTTTTTCTACGTTTGGGA BLAST psRNATarget
Ll_transcript_444759; TRINITY_DN40363_c0_g1_i1 1316 1335 AGCACTGTTTACATTTGGGA BLAST psRNATarget
Ll_transcript_458617; TRINITY_DN49907_c1_g1_i4 488 507 TGCTTTGTTTGAGTTTGGGA BLAST psRNATarget
Ll_transcript_458620; TRINITY_DN49907_c1_g1_i6 495 514 TGCTTTGTTTGAGTTTGGGA BLAST psRNATarget
Ll_transcript_421049; TRINITY_DN48751_c2_g1_i3 197 216 TGCTTTCTCTATATTTGTGA BLAST psRNATarget
Ll_transcript_298494; TRINITY_DN51549_c4_g3_i1 263 282 TGCTCTGTCTGCATTTGTGA BLAST psRNATarget
Ll_transcript_425256; TRINITY_DN43967_c0_g1_i1 877 896 TTTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_425257; TRINITY_DN43967_c0_g1_i2 877 896 TTTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_425258; TRINITY_DN43967_c0_g1_i3 877 896 TTTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_425262; TRINITY_DN43967_c0_g1_i7 877 896 TTTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_425259; TRINITY_DN43967_c0_g1_i4 877 896 TTTTTTGTTTGCATTTGGGG BLAST psRNATarget
Ll_transcript_532105; TRINITY_DN50065_c5_g4_i1 377 396 GACTTTGTCTGCATTTGTGA BLAST psRNATarget
Ll_transcript_513851; TRINITY_DN69218_c0_g1_i1 265 284 AATTTTTTCTGCATTTGGGA BLAST psRNATarget
Ll_transcript_516963; TRINITY_DN51278_c0_g4_i5 2459 2478 CGCATTGTTTACATTTGGAA BLAST psRNATarget
Ll_transcript_529155; TRINITY_DN51019_c2_g1_i1 303 322 TGCTTTCTTTGTGTTTGGGG BLAST psRNATarget
Ll_transcript_293233; TRINITY_DN49124_c0_g4_i1 469 488 TGTTGTGTCTACAATTGGGG BLAST psRNATarget
Ll_transcript_338939; TRINITY_DN48573_c4_g7_i2 136 155 TGTTTTTTCTACAATTGGGG BLAST psRNATarget
Ll_transcript_460763; TRINITY_DN51141_c0_g3_i5 1163 1182 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_303967; TRINITY_DN48254_c3_g3_i6 223 242 TGCTTTCTTTATATTTGGTA BLAST psRNATarget
Ll_transcript_460759; TRINITY_DN51141_c0_g3_i4 1993 2012 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_460772; TRINITY_DN51141_c0_g3_i9 1993 2012 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_460755; TRINITY_DN51141_c0_g3_i2 2273 2292 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_303976; TRINITY_DN48254_c3_g3_i8 223 242 TGCTTTCTTTATATTTGGTA BLAST psRNATarget
Ll_transcript_460768; TRINITY_DN51141_c0_g3_i6 1993 2012 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_460774; TRINITY_DN51141_c0_g3_i11 2273 2292 TGCTTTCTCTGCATTTGAGG BLAST psRNATarget
Ll_transcript_303960; TRINITY_DN48254_c3_g3_i2 223 242 TGCTTTCTTTATATTTGGTA BLAST psRNATarget
Ll_transcript_439247; TRINITY_DN48372_c8_g1_i1 92 111 CCCTTTGACTATGTTTGGGA BLAST psRNATarget
Ll_transcript_442575; TRINITY_DN47865_c1_g1_i1 621 640 CGTTTTGCTTATATTTGGGG BLAST psRNATarget
Ll_transcript_396224; TRINITY_DN41972_c0_g1_i2 1050 1069 TGCTCCGTCTATATTTGGGC BLAST psRNATarget
Ll_transcript_396225; TRINITY_DN41972_c0_g1_i3 1050 1069 TGCTCCGTCTATATTTGGGC BLAST psRNATarget
Ll_transcript_396226; TRINITY_DN41972_c0_g1_i4 1050 1069 TGCTCCGTCTATATTTGGGC BLAST psRNATarget
Ll_transcript_396223; TRINITY_DN41972_c0_g1_i1 1050 1069 TGCTCCGTCTATATTTGGGC BLAST psRNATarget
Ll_transcript_378228; TRINITY_DN50763_c2_g1_i3 3599 3618 AGCTTTGATTAAATTTGGGA BLAST psRNATarget
Ll_transcript_378226; TRINITY_DN50763_c2_g1_i1 3599 3618 AGCTTTGATTAAATTTGGGA BLAST psRNATarget
Ll_transcript_413455; TRINITY_DN45670_c0_g1_i4 104 123 TTCTTTATCTACATTTGGTA BLAST psRNATarget
Ll_transcript_413461; TRINITY_DN45670_c0_g1_i10 104 123 TTCTTTATCTACATTTGGTA BLAST psRNATarget
Ll_transcript_435705; TRINITY_DN48986_c2_g7_i1 323 342 AACTGTGTTTACATTTGGGC BLAST psRNATarget

Expression of miRNA 231


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)