miRNA 232 details

Id Micro232
SequenceTCCCACCGAGCAGCCGGATCTC 
Annotated namesosa-miR1846d-5p; 
Annotated pre-miRNANone

Targets of miRNA 232

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_253914; FTRINITY_DN48121_c0_g1_i1 1772 1793 TGGACCCGGTTGCATGGTGGGA BLAST psRNATarget
Ll_transcript_253915; FTRINITY_DN48121_c0_g1_i2 2196 2217 TGGACCCGGTTGCATGGTGGGA BLAST psRNATarget
Ll_transcript_221920; FTRINITY_DN25069_c0_g1_i1 457 478 AGAGTTTGGTTGCTTGGTGGGT BLAST psRNATarget
Ll_transcript_87569; FTRINITY_DN52400_c0_g1_i36 251 272 TGAATACGGTTGTTCGGTGGTA BLAST psRNATarget
Ll_transcript_87554; FTRINITY_DN52400_c0_g1_i21 251 272 TGAATACGGTTGTTCGGTGGTA BLAST psRNATarget
Ll_transcript_143083; FTRINITY_DN54064_c0_g1_i17 190 211 TGTATATGGCTGCACGGTGGGG BLAST psRNATarget
Ll_transcript_143073; FTRINITY_DN54064_c0_g1_i11 467 488 TGTATATGGCTGCACGGTGGGG BLAST psRNATarget
Ll_transcript_521963; TRINITY_DN46594_c0_g4_i2 1739 1760 TGGACCCGGTTGCATGGTGGGA BLAST psRNATarget
Ll_transcript_521984; TRINITY_DN46594_c0_g4_i3 1984 2005 TGGACCCGGTTGCATGGTGGGA BLAST psRNATarget
Ll_transcript_495928; TRINITY_DN41867_c0_g1_i1 63 84 TGAATACGGTTGTTCGGTGGTA BLAST psRNATarget
Ll_transcript_526141; TRINITY_DN47576_c0_g1_i3 573 594 TGTATATGGCTGCACGGTGGGG BLAST psRNATarget
Ll_transcript_526146; TRINITY_DN47576_c0_g1_i6 573 594 TGTATATGGCTGCACGGTGGGG BLAST psRNATarget
Ll_transcript_526149; TRINITY_DN47576_c0_g1_i8 573 594 TGTATATGGCTGCACGGTGGGG BLAST psRNATarget
Ll_transcript_526142; TRINITY_DN47576_c0_g1_i4 573 594 TGTATATGGCTGCACGGTGGGG BLAST psRNATarget

Expression of miRNA 232


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)