Transcript | Ll_transcript_185885 |
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CDS coordinates | 295-3009 (+) |
Peptide sequence | MATEDLGILLKGHKFHGTGKVVAPNRSGSAPPSMEGSFHAIENLLSQQSSTQNASLATLNRAMQKCESEEELRADPAYLAYYSSHVNLNPRLPPPLISRENRHIRHHNSGFSNNWGLSFADDSKSSLQLSQWTLATHKEESDDDSLQQPYDNELVKTSEMWRRPDAASSTSQHKNVVDLIQEDFPRTMSPVYNKSFSVSHALVDEPIGSDSGSTSSHDPPVSTAEAAKSAGGSDDTRVSSTVDSHAPVASSLSIESTGSVGFSDIDVTTVESQLKALSISNLPNSKSPSNEEKWKTNYQNNLMQHQIYQQQNNPYEVHNASSQSVNYAYIGREQFPHNSSKFSDVQPVLQSSGFTPPLYATAAYMTSANPYYMNFQASGIYTPQYVGGYTLNPTAIPSYITAYPPQSAVPLVDGATSSSYTPLPPGVSSGGSISHGAEMVHANKFPGQFGFPLQSSFGDPFYMQYHQQPFVEGYGISGHFDPLAPRPSGGSQISPFDSQEMASTGAYLDDKILHDQRTIANMNVRKRGFTIPSYYGNSPSMGLVMQYPSSPLPSPVLSGYPEGSSGLPEGRSDMKLSPASSRNTGVLSGWQAQRYFDSTHDPKIVNFLEELKSGKGRRFELSDIIGHIVEFSADQHGSRFIQQKLECCGVEEKALVFKEVLPHTSKLMTDVFGNYVIQKFFEYGSPGQRRELANRLAGQILPLSLQMYGCRVIQKALEVIELEQKAQLVRELDGNVMRCVRDQNGNHVIQKCIESIPTKQIGFIISAFRGQVSNLSMHPYGCRVIQRVLEHCTDEVQCQFIVDEILESVCSLAQDQYGNYVTQHVLERGNHQERSQIISKLSGHVVQLSQHKFASNVVEKCLEYGDVNERELLIAEIVGQDEQDDNLLTMMKDQFANYVVQKVFD |
ORF Type | 3prime_partial |
Blastp | Pumilio homolog 5 from Arabidopsis with 45.68% of identity |
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Blastx | Pumilio homolog 5 from Arabidopsis with 45.57% of identity |
Eggnog | pumilio homolog(COG5099) |
Kegg | Link to kegg annotations (AT3G20250) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431512.1) |
Pfam | Pumilio-family RNA binding repeat (PF00806.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer