Transcript | Ll_transcript_149144 |
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CDS coordinates | 108-1136 (+) |
Peptide sequence | MEALPSASIAQQTWEFENNIIPIDTPSSTTNADDSIFHYDEAAQSEFHREKPWINDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDKDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPDGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHSRFGSLISPAPRKKEEESPLAKITRDSAKITAEQVHGLMSQVIKDILFNSVH* |
ORF Type | complete |
Blastp | COP9 signalosome complex subunit 5b from Arabidopsis with 83.43% of identity |
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Blastx | COP9 signalosome complex subunit 5b from Arabidopsis with 82.25% of identity |
Eggnog | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(COG1310) |
Kegg | Link to kegg annotations (AT1G71230) |
CantataDB | Link to cantataDB annotations (CNT0000267) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019438349.1) |
Pfam | JAB1/Mov34/MPN/PAD-1 ubiquitin protease (PF01398.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer