ta-siRNA 238 details

ID238
SequenceATCAGACGTTATAACTCCTCCACT 

Targets of siRNA 238

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details

Ll_transcript_177044; 287 310 AGTGGAGGAGTTATAACGTCCGAT BLAST
Ll_transcript_177043; 1209 1232 AGTGGAAGAGTTATAACGTTTGAT BLAST
Ll_transcript_177049; 1618 1641 AGTGGAAGAGTTATAACGTTTGAT BLAST
Ll_transcript_115821; 76 99 AGTGGAGGAATTACAACGTCTGAT BLAST
Ll_transcript_115822; 76 99 AGTGGAGGAATTACAACGTCTGAT BLAST
Ll_transcript_115820; 76 99 AGTGGAGGAATTACAACGTCTGAT BLAST
Ll_transcript_115824; 76 99 AGTGGAGGAATTACAACGTCTGAT BLAST
Ll_transcript_348547; 165 188 AGTGGAGGAGTTATAACGTCCGAT BLAST
Ll_transcript_348540; 165 188 AGTGGAGGAGTTATAACGTCCGAT BLAST
Ll_transcript_348523; 165 188 AGTGGAGGAGTTATAACGTCCGAT BLAST
Ll_transcript_348544; 219 242 AGTGGAGGAGTTATAACGTCCGAT BLAST
Ll_transcript_348539; 314 337 AGTGGAGGAGTTATAACGTCCGAT BLAST
Ll_transcript_348524; 161 184 AGTGGAAGAGTTATAACGTTTGAT BLAST
Ll_transcript_348528; 161 184 AGTGGAAGAGTTATAACGTTTGAT BLAST
Ll_transcript_166107; 757 780 GGTGGAGGAGCAGTAGGGTTTGCT BLAST
Ll_transcript_307187; 2411 2434 GGTGGAGGAGCAGTAGGGTTTGCT BLAST

Expression of siRNA 238


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)