Transcript | Ll_transcript_57244 |
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CDS coordinates | 2-3187 (+) |
Peptide sequence | TSFLPPPLKPTTTTTPTTTKPIIPKIHSSLHRDPWSPIDGDITKPKPRTKDPSNPLSDDNARRIINGKARYLSVLRRNQGPQAETPRWIKRSPEQMVQYLEDDRNGQLYGKHVVAAIKKVRALSQRVDGEYEMRMVMATFVGKLSFREMCVVLKEQKGWRQVRDFFAWMKLQLSYRPTVIVYTIVLRLYGQVGKLKLAEETFLEMLDAGCEPDEVACGTMLCSYARWGRDKAMFSFYSAVKERGIILPVAVFNFMLSSLQKKSLHRQVALLWMDMIGKGTIPNAFTYTVVISSLIKEGLHKEALRTFDEMKNNGFVPEEVTYSQLITLSAKSGNRDEVLRLYDDMMLRRIVPSNYTCASLLALYYKYEDFSRALSLFSEMVRNKIPADEVIYGLLIRIYGKLGLYEDAHKTFEETKQKGLLTDEKTYLAMAQVHLSSGNADKALDTIELMKFNNVWFSRFAYIVLLQCYVMKEDVESAEGSFLALCKTGPPDAGSCNDMLSLYIRLNLMNKAKEFIARIREGDILFDEVLYRMVMKVYCKEGMLLEAEQLTNRMVKNESLRKYKFVQTFYWILCQCKEDVQSDDELLAIEPIDKLDTTALGLMLSLYLTDGNFGKTEMLLKLLLGYTGGSKIVSQLITSLTKKGEISKAESLNNQLIRFGYGMDEATAASLISRYGKQHMLKQAEDIFEAYVKSPISSKLLYNSMIDAYAKCGEQGKAYLLYKQAREEGHELGAVGISIVINALTNEGKHQEAENIIRRSLEGNSELDTVAYNTFIKAMLEAGKLQFASSIYEHMCSIGVALSIQTLNTMISVYGKDQKLDKAVDMFNKGRSLGLPLDEKAYMNLIGYYGKAGMMDEASQLFIKMQEEDIKPGMVSYNIMINVYANAGLHHEAEKLFLAMQRQCCSPDSFTYLSLVQAYTVSQNYSKAEETIHAMRSKGIPPSCAHFNILLSALAKAGLISEARRIYEQLSAFGLVPDLVCYRTMVKGYLEHGYVEAGIDFVESISKSIKGDRFILSAAVLFYRSAGNEGKAKEILISMNHLKVPFLKKLVVGSRMKVKTP* |
ORF Type | 5prime_partial |
Blastp | Pentatricopeptide repeat-containing protein At5g27270 from Arabidopsis with 56.38% of identity |
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Blastx | Pentatricopeptide repeat-containing protein At5g27270 from Arabidopsis with 57.62% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT5G27270) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432635.1) |
Pfam | Pentatricopeptide repeat domain (PF13812.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer