miRNA 241 details

Id Micro241
SequenceTCGATAAACCTGTGCATCCAG 
Annotated namesbna-miR162a; 
Annotated pre-miRNANone

Targets of miRNA 241

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_275041; FTRINITY_DN50045_c0_g1_i2 1080 1100 GGCTATGCACAGGTTTATTGA BLAST psRNATarget
Ll_transcript_275044; FTRINITY_DN50045_c0_g1_i4 1382 1402 GGCTATGCACAGGTTTATTGA BLAST psRNATarget
Ll_transcript_275040; FTRINITY_DN50045_c0_g1_i1 1509 1529 GGCTATGCACAGGTTTATTGA BLAST psRNATarget
Ll_transcript_275043; FTRINITY_DN50045_c0_g1_i3 1739 1759 GGCTATGCACAGGTTTATTGA BLAST psRNATarget
Ll_transcript_191120; FTRINITY_DN55754_c0_g1_i4 5 25 GCAGACGCATAGGTTTATCGA BLAST psRNATarget
Ll_transcript_191131; FTRINITY_DN55754_c0_g1_i9 5 25 GCAGACGCATAGGTTTATCGA BLAST psRNATarget
Ll_transcript_91245; FTRINITY_DN53995_c1_g2_i2 377 397 GTGGATTCACAGGTTTGTCCA BLAST psRNATarget
Ll_transcript_44601; FTRINITY_DN54188_c1_g2_i10 1863 1883 ATGGTTGCACAGGTATATTGA BLAST psRNATarget
Ll_transcript_44584; FTRINITY_DN54188_c1_g2_i1 2197 2217 ATGGTTGCACAGGTATATTGA BLAST psRNATarget
Ll_transcript_44592; FTRINITY_DN54188_c1_g2_i5 2535 2555 ATGGTTGCACAGGTATATTGA BLAST psRNATarget
Ll_transcript_44588; FTRINITY_DN54188_c1_g2_i3 2682 2702 ATGGTTGCACAGGTATATTGA BLAST psRNATarget
Ll_transcript_50475; FTRINITY_DN58840_c0_g1_i4 3546 3566 GTACATGCACAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_50490; FTRINITY_DN58840_c0_g1_i19 3421 3441 GTACATGCACAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_50477; FTRINITY_DN58840_c0_g1_i6 3532 3552 GTACATGCACAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_50489; FTRINITY_DN58840_c0_g1_i18 3695 3715 GTACATGCACAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_50480; FTRINITY_DN58840_c0_g1_i9 3718 3738 GTACATGCACAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_50484; FTRINITY_DN58840_c0_g1_i13 3760 3780 GTACATGCACAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_50487; FTRINITY_DN58840_c0_g1_i16 3290 3310 GTACATGCACAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_50499; FTRINITY_DN58840_c0_g1_i27 3389 3409 GTACATGCACAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_50483; FTRINITY_DN58840_c0_g1_i12 3389 3409 GTACATGCACAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_50492; FTRINITY_DN58840_c0_g1_i21 3389 3409 GTACATGCACAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_88198; FTRINITY_DN52430_c0_g1_i1 352 372 CTGCATGCACAAGTTTGTTGA BLAST psRNATarget
Ll_transcript_88201; FTRINITY_DN52430_c0_g1_i4 352 372 CTGCATGCACAAGTTTGTTGA BLAST psRNATarget
Ll_transcript_88200; FTRINITY_DN52430_c0_g1_i3 352 372 CTGCATGCACAAGTTTGTTGA BLAST psRNATarget
Ll_transcript_270984; FTRINITY_DN85903_c0_g1_i1 285 305 ATGGATGTACATGTTTAGCGA BLAST psRNATarget
Ll_transcript_233929; FTRINITY_DN52891_c3_g1_i3 525 545 ATGGATGCACATGTTTGTCAA BLAST psRNATarget
Ll_transcript_233928; FTRINITY_DN52891_c3_g1_i2 525 545 ATGGATGCACATGTTTGTCAA BLAST psRNATarget
Ll_transcript_35926; FTRINITY_DN58716_c0_g4_i7 263 283 TTGGGTATATGGGTTTATTGA BLAST psRNATarget
Ll_transcript_35903; FTRINITY_DN58716_c0_g4_i1 1529 1549 TTGGGTATATGGGTTTATTGA BLAST psRNATarget
Ll_transcript_35946; FTRINITY_DN58716_c0_g4_i11 1634 1654 TTGGGTATATGGGTTTATTGA BLAST psRNATarget
Ll_transcript_35904; FTRINITY_DN58716_c0_g4_i2 2123 2143 TTGGGTATATGGGTTTATTGA BLAST psRNATarget
Ll_transcript_35916; FTRINITY_DN58716_c0_g4_i4 2488 2508 TTGGGTATATGGGTTTATTGA BLAST psRNATarget
Ll_transcript_35905; FTRINITY_DN58716_c0_g4_i3 2653 2673 TTGGGTATATGGGTTTATTGA BLAST psRNATarget
Ll_transcript_80514; FTRINITY_DN58146_c1_g4_i2 2758 2779 AGGGGTGCACAGGTTTAATCGA BLAST psRNATarget
Ll_transcript_80524; FTRINITY_DN58146_c1_g4_i5 2989 3010 AGGGGTGCACAGGTTTAATCGA BLAST psRNATarget
Ll_transcript_80504; FTRINITY_DN58146_c1_g4_i1 2758 2779 AGGGGTGCACAGGTTTAATCGA BLAST psRNATarget
Ll_transcript_80518; FTRINITY_DN58146_c1_g4_i3 2989 3010 AGGGGTGCACAGGTTTAATCGA BLAST psRNATarget
Ll_transcript_202493; FTRINITY_DN56427_c9_g1_i1 193 213 ATGGGTTCATAGGTTTATCAA BLAST psRNATarget
Ll_transcript_41833; FTRINITY_DN87345_c0_g1_i1 109 129 GAAGATGTATAGGTTTATTGT BLAST psRNATarget
Ll_transcript_19101; FTRINITY_DN54568_c4_g1_i2 1034 1054 GTGGGTTCACAGGTTGGTCGA BLAST psRNATarget
Ll_transcript_19106; FTRINITY_DN54568_c4_g1_i7 975 995 GTGGGTTCACAGGTTGGTCGA BLAST psRNATarget
Ll_transcript_19108; FTRINITY_DN54568_c4_g1_i9 1034 1054 GTGGGTTCACAGGTTGGTCGA BLAST psRNATarget
Ll_transcript_226124; FTRINITY_DN56111_c0_g1_i10 1140 1160 TTGCATGGATAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_226141; FTRINITY_DN56111_c0_g1_i26 1698 1718 TTGCATGGATAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_93648; FTRINITY_DN54894_c1_g2_i5 1994 2014 GCAGATGCACATGTTTATTGG BLAST psRNATarget
Ll_transcript_24479; FTRINITY_DN53840_c0_g1_i18 1601 1621 GGGGGTGGACAGGTTTGTTGT BLAST psRNATarget
Ll_transcript_24471; FTRINITY_DN53840_c0_g1_i10 1831 1851 GGGGGTGGACAGGTTTGTTGT BLAST psRNATarget
Ll_transcript_24478; FTRINITY_DN53840_c0_g1_i17 1995 2015 GGGGGTGGACAGGTTTGTTGT BLAST psRNATarget
Ll_transcript_24473; FTRINITY_DN53840_c0_g1_i12 1995 2015 GGGGGTGGACAGGTTTGTTGT BLAST psRNATarget
Ll_transcript_24482; FTRINITY_DN53840_c0_g1_i21 1581 1601 GGGGGTGGACAGGTTTGTTGT BLAST psRNATarget
Ll_transcript_24469; FTRINITY_DN53840_c0_g1_i8 2015 2035 GGGGGTGGACAGGTTTGTTGT BLAST psRNATarget
Ll_transcript_24464; FTRINITY_DN53840_c0_g1_i3 2225 2245 GGGGGTGGACAGGTTTGTTGT BLAST psRNATarget
Ll_transcript_392726; TRINITY_DN45997_c0_g1_i3 1063 1083 GGCTATGCACAGGTTTATTGA BLAST psRNATarget
Ll_transcript_392730; TRINITY_DN45997_c0_g1_i5 1190 1210 GGCTATGCACAGGTTTATTGA BLAST psRNATarget
Ll_transcript_392728; TRINITY_DN45997_c0_g1_i4 1293 1313 GGCTATGCACAGGTTTATTGA BLAST psRNATarget
Ll_transcript_392725; TRINITY_DN45997_c0_g1_i2 1365 1385 GGCTATGCACAGGTTTATTGA BLAST psRNATarget
Ll_transcript_392731; TRINITY_DN45997_c0_g1_i6 1492 1512 GGCTATGCACAGGTTTATTGA BLAST psRNATarget
Ll_transcript_392722; TRINITY_DN45997_c0_g1_i1 1595 1615 GGCTATGCACAGGTTTATTGA BLAST psRNATarget
Ll_transcript_372163; TRINITY_DN47076_c1_g1_i6 698 718 GTGGATTCACAGGTTTGTCCA BLAST psRNATarget
Ll_transcript_372163; TRINITY_DN47076_c1_g1_i6 866 886 GTGGATTCACAGGTTTGTCCA BLAST psRNATarget
Ll_transcript_372171; TRINITY_DN47076_c1_g1_i13 698 718 GTGGATTCACAGGTTTGTCCA BLAST psRNATarget
Ll_transcript_372166; TRINITY_DN47076_c1_g1_i9 686 706 GTGGATTCACAGGTTTGTCCA BLAST psRNATarget
Ll_transcript_372172; TRINITY_DN47076_c1_g1_i14 715 735 GTGGATTCACAGGTTTGTCCA BLAST psRNATarget
Ll_transcript_466795; TRINITY_DN49217_c3_g2_i6 1147 1167 GTACATGCACAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_466781; TRINITY_DN49217_c3_g2_i1 1147 1167 GTACATGCACAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_466784; TRINITY_DN49217_c3_g2_i2 1147 1167 GTACATGCACAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_522180; TRINITY_DN46591_c4_g1_i11 1685 1705 ATGGTTGCACAGGTATATTGA BLAST psRNATarget
Ll_transcript_522164; TRINITY_DN46591_c4_g1_i2 2792 2812 ATGGTTGCACAGGTATATTGA BLAST psRNATarget
Ll_transcript_522179; TRINITY_DN46591_c4_g1_i10 2861 2881 ATGGTTGCACAGGTATATTGA BLAST psRNATarget
Ll_transcript_522185; TRINITY_DN46591_c4_g1_i14 2972 2992 ATGGTTGCACAGGTATATTGA BLAST psRNATarget
Ll_transcript_522162; TRINITY_DN46591_c4_g1_i1 2792 2812 ATGGTTGCACAGGTATATTGA BLAST psRNATarget
Ll_transcript_522182; TRINITY_DN46591_c4_g1_i12 2861 2881 ATGGTTGCACAGGTATATTGA BLAST psRNATarget
Ll_transcript_522173; TRINITY_DN46591_c4_g1_i7 2972 2992 ATGGTTGCACAGGTATATTGA BLAST psRNATarget
Ll_transcript_415628; TRINITY_DN49691_c1_g1_i5 362 382 CTGCATGCACAAGTTTGTTGA BLAST psRNATarget
Ll_transcript_415621; TRINITY_DN49691_c1_g1_i1 362 382 CTGCATGCACAAGTTTGTTGA BLAST psRNATarget
Ll_transcript_415623; TRINITY_DN49691_c1_g1_i2 362 382 CTGCATGCACAAGTTTGTTGA BLAST psRNATarget
Ll_transcript_389413; TRINITY_DN527_c0_g1_i1 187 207 ATGGATGCACATGTTTGTCAA BLAST psRNATarget
Ll_transcript_300642; TRINITY_DN51541_c1_g1_i7 2556 2576 TTGGGTATATGGGTTTATTGA BLAST psRNATarget
Ll_transcript_300640; TRINITY_DN51541_c1_g1_i6 3049 3069 TTGGGTATATGGGTTTATTGA BLAST psRNATarget
Ll_transcript_435478; TRINITY_DN46641_c0_g3_i2 2758 2779 AGGGGTGCACAGGTTTAATCGA BLAST psRNATarget
Ll_transcript_435477; TRINITY_DN46641_c0_g3_i1 2989 3010 AGGGGTGCACAGGTTTAATCGA BLAST psRNATarget
Ll_transcript_333166; TRINITY_DN68087_c0_g1_i1 73 93 ACATATGCACAGGTTTATGGA BLAST psRNATarget
Ll_transcript_473135; TRINITY_DN52068_c0_g5_i1 4 24 ATGAATGCACAGGTTTGTTTA BLAST psRNATarget
Ll_transcript_390063; TRINITY_DN46462_c2_g1_i1 675 695 GAAGATGTATAGGTTTATTGT BLAST psRNATarget
Ll_transcript_412089; TRINITY_DN45058_c0_g1_i4 995 1015 GTGGGTTCACAGGTTGGTCGA BLAST psRNATarget
Ll_transcript_412090; TRINITY_DN45058_c0_g1_i5 1015 1035 GTGGGTTCACAGGTTGGTCGA BLAST psRNATarget
Ll_transcript_412094; TRINITY_DN45058_c0_g1_i9 1015 1035 GTGGGTTCACAGGTTGGTCGA BLAST psRNATarget
Ll_transcript_412086; TRINITY_DN45058_c0_g1_i1 1015 1035 GTGGGTTCACAGGTTGGTCGA BLAST psRNATarget
Ll_transcript_412096; TRINITY_DN45058_c0_g1_i11 995 1015 GTGGGTTCACAGGTTGGTCGA BLAST psRNATarget
Ll_transcript_412092; TRINITY_DN45058_c0_g1_i7 1015 1035 GTGGGTTCACAGGTTGGTCGA BLAST psRNATarget
Ll_transcript_412097; TRINITY_DN45058_c0_g1_i12 2166 2186 GTGGGTTCACAGGTTGGTCGA BLAST psRNATarget
Ll_transcript_412087; TRINITY_DN45058_c0_g1_i2 2186 2206 GTGGGTTCACAGGTTGGTCGA BLAST psRNATarget
Ll_transcript_412101; TRINITY_DN45058_c0_g1_i16 2186 2206 GTGGGTTCACAGGTTGGTCGA BLAST psRNATarget
Ll_transcript_412100; TRINITY_DN45058_c0_g1_i15 2166 2186 GTGGGTTCACAGGTTGGTCGA BLAST psRNATarget
Ll_transcript_412093; TRINITY_DN45058_c0_g1_i8 2186 2206 GTGGGTTCACAGGTTGGTCGA BLAST psRNATarget
Ll_transcript_301985; TRINITY_DN48238_c0_g2_i11 823 843 TTGCATGGATAGGTTTGTTGA BLAST psRNATarget
Ll_transcript_290551; TRINITY_DN49138_c0_g5_i1 1691 1711 GCAGATGCACATGTTTATTGG BLAST psRNATarget
Ll_transcript_290553; TRINITY_DN49138_c0_g5_i3 2138 2158 GCAGATGCACATGTTTATTGG BLAST psRNATarget
Ll_transcript_276915; TRINITY_DN45764_c0_g6_i1 334 354 AATGTTGCACTGGTTTATCGA BLAST psRNATarget
Ll_transcript_454145; TRINITY_DN49798_c0_g8_i2 327 347 TAAGATGAACAGGTTCATCGA BLAST psRNATarget
Ll_transcript_371564; TRINITY_DN47042_c0_g1_i10 438 458 GGGGGTGGACAGGTTTGTTGT BLAST psRNATarget
Ll_transcript_371569; TRINITY_DN47042_c0_g1_i15 438 458 GGGGGTGGACAGGTTTGTTGT BLAST psRNATarget
Ll_transcript_454138; TRINITY_DN49798_c0_g8_i1 911 931 TAAGATGAACAGGTTCATCGA BLAST psRNATarget
Ll_transcript_380878; TRINITY_DN51412_c0_g9_i1 301 321 TAGCATGCACAGTTTTGTTGA BLAST psRNATarget

Expression of miRNA 241


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)