Transcript | Ll_transcript_260238 |
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CDS coordinates | 554-2320 (+) |
Peptide sequence | MSRIFSRWKKVKEMASLSDTHLAIYSNNRCMNRTGFKFNQMRPISTHLKNSNLHTIAAHRRREPLIGVQERYKSDRGGSGDISSPARRIRAEANCPRCTKDMNLIFSSNHFPPSDSNSGSESFDSNLASPSISEEGSGYQSVNICPSCKSAYHFRPNNTAPLQGTFVEIGRGSNSNTNSVAKSGGSKIPRRITHGKGSSSGKNGISGNWLEVATWDNIRSAKINGHNGEPPEDWPPPPPPIGNDGNGNGLAVHNPPGPSFAPGVNVIRHTGLRDGRAGGGGGGSNGEKTTWGGSNLGKDLPSPKEICKGLDKFVIGQDRAKKVLSVAVYNHYKRIYHATLQKGSGPDSGILEGFDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFIIADATTLTQAGYVGEDVESILYKLLAAADFNVAAAQQGIIYIDEVDKIIKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKNPRGDSIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAGGLTDSAVVSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLMLVFLHCLS* |
ORF Type | complete |
Blastp | CLP protease regulatory subunit CLPX3, mitochondrial from Arabidopsis with 55.79% of identity |
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Blastx | CLP protease regulatory subunit CLPX1, mitochondrial from Arabidopsis with 83.85% of identity |
Eggnog | ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (By similarity)(COG1219) |
Kegg | Link to kegg annotations (AT1G33360) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449440.1) |
Pfam | AAA domain (Cdc48 subfamily) (PF07724.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer