ta-siRNA 243 details

ID243
SequenceATCGCATTTCTGGTCCACGACTCC 

Targets of siRNA 243

LuluDB transcript

Target start position

Target end position

Target sequence

BLAST target sequence

Target details
Ll_transcript_135433; 181 204 GGAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_135432; 199 222 GGAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_146569; 85 108 GGAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_100770; 41 64 AAAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_100755; 156 179 AAAATCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_100753; 774 797 AAAATCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_100751; 1938 1961 AAAATCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_273901; 2944 2967 AAAGTCGTGGACCAGAAATGCGAG BLAST
Ll_transcript_14729; 272 295 AAAGTAGTGGACCAGAAATGCGAT BLAST
Ll_transcript_211667; 160 183 GGAGTCGTGGACCACAAATGCGAT BLAST
Ll_transcript_72826; 64 87 GGAGTCGTGGACCTGAAATGCGAT BLAST
Ll_transcript_99669; 70 93 CAAGTCGTGGACCAGTAATGCGAT BLAST
Ll_transcript_100764; 187 210 AAAATCGTGGACCAGAAATGTGAT BLAST
Ll_transcript_100756; 930 953 AAAATCGTGGACCAGAAATGTGAT BLAST
Ll_transcript_273901; 2977 3000 AATTTCGTGCACCAGAAATGCGAG BLAST
Ll_transcript_99678; 4026 4051 GGTAAGTCGTGGACCAGAAATGCAAC BLAST
Ll_transcript_99672; 4590 4615 GGTAAGTCGTGGACCAGAAATGCAAC BLAST
Ll_transcript_99670; 4602 4627 GGTAAGTCGTGGACCAGAAATGCAAC BLAST
Ll_transcript_297230; 185 208 GGAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_415416; 77 100 GGAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_297227; 648 671 GGAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_297243; 1469 1492 GGAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_297224; 258 281 AAAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_446469; 1265 1288 AAAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_446461; 1265 1288 AAAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_446449; 764 787 AAAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_446458; 1265 1288 AAAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_446451; 764 787 AAAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_446459; 764 787 AAAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_446450; 764 787 AAAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_446460; 1265 1288 AAAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_446448; 1265 1288 AAAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_446465; 1265 1288 AAAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_446468; 1265 1288 AAAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_446455; 1265 1288 AAAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_484307; 155 178 AAAATCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_484305; 155 178 AAAATCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_484306; 233 256 AAAATCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_484296; 233 256 AAAATCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_484290; 233 256 AAAATCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_484301; 814 837 AAAATCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_484302; 814 837 AAAATCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_484297; 814 837 AAAATCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_415454; 2956 2979 AAAGTCGTGGACCAGAAATGCGAG BLAST
Ll_transcript_524493; 70 93 GGAGTCGTGGACCTGAAATGCGAT BLAST
Ll_transcript_516949; 191 214 GGAGTCGTGGACCACAAATGCGAT BLAST
Ll_transcript_286196; 92 115 GGAGTCGTGGACCACAAATGCGAT BLAST
Ll_transcript_286200; 92 115 GGAGTCGTGGACCACAAATGCGAT BLAST
Ll_transcript_286193; 92 115 GGAGTCGTGGACCACAAATGCGAT BLAST
Ll_transcript_516952; 722 745 GGAGTCGTGGACCACAAATGCGAT BLAST
Ll_transcript_297228; 1213 1236 GGAGTCGTGGACGAGAAATGCGAT BLAST
Ll_transcript_297235; 1469 1492 GGAGTCGTGGACGAGAAATGCGAT BLAST
Ll_transcript_297246; 1546 1569 GGAGTCGTGGACGAGAAATGCGAT BLAST
Ll_transcript_286202; 199 222 AGAGTCGTGGACAAGAAATGCGAT BLAST
Ll_transcript_446464; 1265 1288 AAAGTCGTGGAGCAGAAATGCGAT BLAST
Ll_transcript_530105; 388 413 GGAAACTCGTGGACCAGAAATGTGAT BLAST
Ll_transcript_530103; 388 413 GGAAACTCGTGGACCAGAAATGTGAT BLAST
Ll_transcript_415454; 2989 3012 AATTTCGTGCACCAGAAATGCGAG BLAST
Ll_transcript_441331; 782 807 GGAAACTCGTAGACCAGAAATACGAT BLAST
Ll_transcript_441336; 1051 1076 GGAAACTCGTAGACCAGAAATACGAT BLAST
Ll_transcript_128095; 876 899 AAAGTCGTGGATGAGAAATGCGAT BLAST
Ll_transcript_126977; 2150 2174 GGAAGTCGTGGATGAGAAATGCGAT BLAST
Ll_transcript_135432; 199 222 GGAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_135433; 181 204 GGAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_297230; 185 208 GGAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_398809; 848 871 AAAGTCGTGGATGAGAAATGCGAT BLAST
Ll_transcript_260126; 3851 3878 GGAGTTGTAGGAAGGACCGGAAGTGGAA BLAST
Ll_transcript_135433; 181 204 GGAGTCGTGGACCAGAAATGCGAT BLAST
Ll_transcript_511730; 1245 1267 GGAGTTGCGGACCAACATGCGGC BLAST
Ll_transcript_455069; 3880 3907 GGAGTTGTAGGAAGGACCGGAAGTGGAA BLAST
Ll_transcript_297230; 185 208 GGAGTCGTGGACCAGAAATGCGAT BLAST

Expression of siRNA 243


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)