Transcript | Ll_transcript_78600 |
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CDS coordinates | 2-5368 (+) |
Peptide sequence | NFGSNFSTISLHHLPKLFPSFFCFIHFPIFSLNSSHQRSDMDSHSENLTSLFQKPQPEELHHRKPRLGRKPKKRRRFHQATEIGASSGNFTSDDNNLVVEDSEFKGILEGNGSVGVNSGVCGELGCGFDTSLGLGNGKSNGSEVTRVRIIASEEGLDHKSVEANGNVLDLNARINLNLNEGFSSPFNNVEDDGSLKRRDSVDLNLDVDNEEDGGDRSVCYLGHSGGVMLAEDGTIDLNVDVGEERGDGVDGNGRSELDASFDKIQQTDNMNQKSTEGNDMYVNLNDVSNAYKSDAIHVCMERAALGAATCLIEEKEGDDVNGDASAIDSLQVTNVVSAKDCDYMEVQQIDNSPSAFQGSSQRKRRKVSKNVKSTTETILRRSSRQASARKQVSGTIALQEMYDPLLSVVPSSLTEEKPVTSGDEKYEQCNVPPPKLQLPPSSQNLNLDDVPVLELFSIYAFLRSFSTFLFLSPFELEDLVAAVKSETPSMLFDSIHVSILHTLRKHLEYLSSEGCQSAADCLRNLNWDFLDLVTWPIFMAEYLLIHASGFKTAFDLNHLMFRTDYCKQPVNVKIMILQYLCDDMIEVEASRSELNRRSLTKEADMGFDQNMYFDTCKKRRAVTDISGGSCLTEIVDDTIDWNSDECCLCKMDGSLICCDGCPAAFHPRCVGIASGNLPEGDWYCPECAIGPHRAWTKSHKSLRGADLLGIDHHGRLYFSSCGYLLVSDSSGTDSLFSYYHKNDIHVVVEVLKSMGTLYGSILMAIYEHWDIPANLCVGTSNLVVFNQSSCKNVHMSGKYYASLDNNLADDQRKLDENSTADCSTHPGQDFPKAGTRLDSMTTIESPCVASEGSADTTQMRSGIENVQMPGLYGSTRSDESLNQSGKPEKHHPVGDCSLTSSSLDVGHKINLSSVGASCTPATDNKDTSEVPFGANYVNYYSFARTAALVAQELMCKSPEKINKNYAMSDEDIISEQGKAIIKKSSNFCWPSIQNLNDVAEKEKCGWCFYCKVANDDRDCLFNDVMKSVRGVSNSTLVGLQSRKIQNGHLTAIICQIVSLEDRLRGLLLGPWLDPHQTNLWHKELMKTSDFVPVKRLLLLLESNLRHFALSADWLKHADSVTTMGSSTHIVVSSSRTSSRHGIPRKRARYSDIGSNSSSTTTNGLGLFWWRGGRLSRQLFNWKYLPRSLVTKAARQAGYTKIPDILYPENSDFARRSKCVAWRAAVERSTSVEQLALQVRELYSNIKWHDIENSHPQYVLDKESKKSIRLFKKVIVRRKCSEEQSVKYLLDFGGKRRSIPDIVVKHGSLLEEPSSERKKYWLDESYLPLHLLKNFEEKRIVRKSTGKKHEKVIEIGRVNKRIPREKVFSYLFSKMERSDCQQCGHCNKDVPIREAVSCLHCKGYFHKRHVRRSRGTSTTGYTYSCHRCQDGMHVKANNTSRRRVDSKLQKIQSQNCKSLPSLCKSVNLNGNKKALSKARQLRSQTNKKIPPSVPLRRSARKVKSLYLHRQMNRGHKKGIQSKKNVGRKKGTQNKSKKLTSQKSKAITAQCKTLAVTTVCKKRTNVYSSYWLNGIRFSTKPNDERVMLFREKKHVVSSEDFPGSNDHRKCCLCCQDGCTSNYIACETCGDWFHGDAFGLTLDNARQIIGFRCHVCRDRAAPVCPHMKINALPHAESNMSTECAEELSNPVSLQPLSVNDRARPVMQVYTRRAKHGIKRVERREEGGSGNSAREFLGPQQEVFNMESKNEGEQENWNHNQLASCQASIGGEEDLGTTTAARRGGVFGGIAA* |
ORF Type | 5prime_partial |
Blastp | DDT domain-containing protein PTM from Arabidopsis with 38.54% of identity |
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Blastx | DDT domain-containing protein PTM from Arabidopsis with 38.32% of identity |
Eggnog | Membrane-associated zinc metalloprotease(COG0750) |
Kegg | Link to kegg annotations (AT5G35210) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019454299.1) |
Pfam | DDT domain (PF02791.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer