Transcript | Ll_transcript_79340 |
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CDS coordinates | 582-5933 (+) |
Peptide sequence | MDQKEPQVEVSWLPTTPAKPILMKPVPICEPEVQNQQLGCKDDNEAVACYEFSAGAVPGSTLANSVSGNGKTCVQTASDNFSGWSKLGFSELLFLTEAGSGMLPDNHNGLENPFIPSLMSQFNGDVQGTSHTAGCSKEISEDILTPANAIRAESKQIASPHINVEEKGPRGEEENISAKTLGDNGTSPNKELSEPVVESAAVSTQLKENDNPDYGSSHDIDLTKTPQQKPKRRRKHRPKVIIEGKPKRTRKPATQKPAQAKETPTVKRKYVRKKGLNNTSIPPTEMMGELTEEINPESAKQPCRRSLNFDIGPIDESSACRENETAHLGKETGVVEQQTNVGLAHDLSTTTSPSKENPPEKRKYVRRKKMSKTSAPTIEVTGELPKGVMAESTKNSCGKSLDIGIGATDQSLAGIENATVHLGNEIDVATQETNVGLSYDLKTSTEKASNNYMPLSKDTQAPGTSSSKSTPPAAEVKVDTTTKRKYVRRKGPNKSIPPAEMAAALTEPVVLDSNNMSWRSSSGGQNLSEHISMDNNSKKELDSSMSLPEDIQAPRTCPAKTNSSVAKSEEKAASKRKYSRRKRLSNSSTHPTEMTTNLIQPTMLESTEIEQRRSLYFDAGARDESSACRQNLNVHNCKENSAVAEGTHAGLTYDQGTYMKQALYNFMSLPEDIQVSNTSSKSNSPGAKLNANSVENRSRKNGQGIVEDGHENSAKLLLKSVRESNPNDSNISNSQISMRLQMVGSKRSHCDTSRFANASSMNDIGAYYNGFPSYQNMFSIQFPNLQKRRRSENGKSSNAYTTSSVTTIKEAELTFSQEVAQVHPYASSSSCWNFCSEYNAARVPTISEATGSVIDDDQAFEEFKLSLRRAQIYDCVSLTRIRNFDSEPNYSGHELCFSDRQAFGNAQGLQTSIDALVTETRASLTKNKNKSVVSRSPYSTINEMQQCQSFALGNYHQPIAVASEVRPIMLYVNALAEKLSQLNINKGAKDLALVPYKKKKKKRSLVNGDGTIIPFNGSFSPIRKQLPRPKVDIDEETDRVWKLLMLDINSHGIDGTDEDKAKWWEDERNIFRGRADSFIARMHLVQGDRRFTRWKGSVLDSVVGVFLTQNVSDHLSSSAFMSLAARYPKKFSETYHGEGTVVANEPEVHIVEPEESTEWDSQILDKSVYDHSSMTIDISEHSGEKADNSSSRTTNGAISITYESSCKLSESSERNTGKQYSPIRSGPISTMSEEGEEKSCYEGVRKELNDIVSSQDSVISSQISGDSSNDQNPEKIGSCSDSNSEVENLSSTAKHTSFYNSTSFSKLVEMASSSKLYEVNSKKCNSTENLRDAFGLGMMHDHSAETLEKSNLIEGSLEASITTSHPIQKDTSRNEINEISSAPVQLQSRGQAKDKNEEINWDNLRIQAQAKAGKREKTKDTMDSLDWEAVRCADVNEIANTIKERGMNNRLADRIKNFLNRLVEEHGDIDLEWLRDVPPDQAKEYLLSVKGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPIQPLPESLQLHLLELYPILESIQKYLWPRLCKLDQKTLYELHYQMITFGKVFCTKSKPNCNACPMRAECRHFASAFASARLALPGPEQKSIVSTSANNVNDQNPPVIFNQLYLQPAENTNQAEDIQQTELSRQLYSKPEINSCQPIIEEPTTPDPECSQLPQDDIEDAFYYDDSCEIPTIKLNMEEFTTNLQNYMQQNMALQEGEMSKALVSLNPEAASIPVPKLKNVSRLRTEHCVYELPDTHPLLEGVSYCYIC* |
ORF Type | complete |
Blastp | Protein ROS1 from Arabidopsis with 43.67% of identity |
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Blastx | Protein ROS1 from Arabidopsis with 65.05% of identity |
Eggnog | endonuclease III(COG0177) |
Kegg | Link to kegg annotations (AT2G36490) |
CantataDB | Link to cantataDB annotations (CNT0000689) |
Mirbase | mtr-MIR2086 (MI0010539) |
Ncbi protein | Link to NCBI protein (XP_019453313.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer