miRNA 245 details

Id Micro245
SequenceTCGCTTGGTGCAGGTCGGG 
Annotated namesgma-miR168b; 
Annotated pre-miRNANone

Targets of miRNA 245

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_224758; FTRINITY_DN56194_c3_g9_i1 122 140 CCCGACCTGCACCAAGCGA BLAST psRNATarget
Ll_transcript_261489; FTRINITY_DN51273_c0_g1_i4 203 221 CCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_261488; FTRINITY_DN51273_c0_g1_i3 628 646 CCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_261486; FTRINITY_DN51273_c0_g1_i2 631 649 CCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_261484; FTRINITY_DN51273_c0_g1_i1 679 697 CCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_261491; FTRINITY_DN51273_c0_g3_i2 573 591 CCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_261487; FTRINITY_DN51273_c0_g3_i1 597 615 CCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_129521; FTRINITY_DN53468_c4_g1_i14 791 809 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129499; FTRINITY_DN53468_c4_g1_i3 1202 1220 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_108863; FTRINITY_DN50712_c0_g1_i3 728 746 CTGGATCTGTACCAAGCGA BLAST psRNATarget
Ll_transcript_129522; FTRINITY_DN53468_c4_g1_i15 2525 2543 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_108860; FTRINITY_DN50712_c0_g1_i1 728 746 CTGGATCTGTACCAAGCGA BLAST psRNATarget
Ll_transcript_108866; FTRINITY_DN50712_c0_g1_i6 728 746 CTGGATCTGTACCAAGCGA BLAST psRNATarget
Ll_transcript_129505; FTRINITY_DN53468_c4_g1_i6 2751 2769 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_108861; FTRINITY_DN50712_c0_g1_i2 728 746 CTGGATCTGTACCAAGCGA BLAST psRNATarget
Ll_transcript_129518; FTRINITY_DN53468_c4_g1_i13 2936 2954 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129500; FTRINITY_DN53468_c4_g1_i4 3545 3563 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129501; FTRINITY_DN53468_c4_g1_i5 3675 3693 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129498; FTRINITY_DN53468_c4_g1_i2 3901 3919 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129506; FTRINITY_DN53468_c4_g1_i7 3956 3974 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129497; FTRINITY_DN53468_c4_g1_i1 4086 4104 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129510; FTRINITY_DN53468_c4_g1_i9 4695 4713 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129513; FTRINITY_DN53468_c4_g1_i11 4921 4939 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129509; FTRINITY_DN53468_c4_g1_i8 5106 5124 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_133026; FTRINITY_DN57565_c2_g2_i1 647 665 CACGAGCTGCACCAGGCGA BLAST psRNATarget
Ll_transcript_172982; FTRINITY_DN57036_c0_g1_i10 1657 1675 CTTGACTTGCACCAGGTGG BLAST psRNATarget
Ll_transcript_172985; FTRINITY_DN57036_c0_g1_i13 1710 1728 CTTGACTTGCACCAGGTGG BLAST psRNATarget
Ll_transcript_172994; FTRINITY_DN57036_c0_g1_i21 1800 1818 CTTGACTTGCACCAGGTGG BLAST psRNATarget
Ll_transcript_172990; FTRINITY_DN57036_c0_g1_i18 1853 1871 CTTGACTTGCACCAGGTGG BLAST psRNATarget
Ll_transcript_172983; FTRINITY_DN57036_c0_g1_i11 1922 1940 CTTGACTTGCACCAGGTGG BLAST psRNATarget
Ll_transcript_135351; FTRINITY_DN58024_c0_g1_i4 1435 1453 CTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_135357; FTRINITY_DN58024_c0_g1_i8 1435 1453 CTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_135366; FTRINITY_DN58024_c0_g1_i16 1435 1453 CTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_135349; FTRINITY_DN58024_c0_g1_i2 1435 1453 CTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_135365; FTRINITY_DN58024_c0_g1_i15 1435 1453 CTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_205114; FTRINITY_DN56951_c2_g2_i9 503 521 TCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_205113; FTRINITY_DN56951_c2_g2_i8 503 521 TCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_205111; FTRINITY_DN56951_c2_g2_i6 503 521 TCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_21930; FTRINITY_DN55132_c1_g3_i8 650 668 TTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_21897; FTRINITY_DN55132_c1_g3_i4 521 539 TTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_21911; FTRINITY_DN55132_c1_g3_i7 1106 1124 TTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_40261; FTRINITY_DN47198_c0_g1_i2 930 948 TCCGAGTTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_21889; FTRINITY_DN55132_c1_g3_i2 977 995 TTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_40260; FTRINITY_DN47198_c0_g1_i1 930 948 TCCGAGTTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_21902; FTRINITY_DN55132_c1_g3_i5 650 668 TTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_21894; FTRINITY_DN55132_c1_g3_i3 650 668 TTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_21887; FTRINITY_DN55132_c1_g3_i1 1106 1124 TTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_21908; FTRINITY_DN55132_c1_g3_i6 1106 1124 TTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_317376; TRINITY_DN44834_c0_g2_i1 672 690 CCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_317377; TRINITY_DN44834_c0_g1_i2 548 566 CCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_317375; TRINITY_DN44834_c0_g1_i1 579 597 CCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_452213; TRINITY_DN43238_c0_g1_i5 718 736 CTGGATCTGTACCAAGCGA BLAST psRNATarget
Ll_transcript_360323; TRINITY_DN47600_c1_g1_i10 2489 2507 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_360307; TRINITY_DN47600_c1_g1_i7 2502 2520 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_452210; TRINITY_DN43238_c0_g1_i2 718 736 CTGGATCTGTACCAAGCGA BLAST psRNATarget
Ll_transcript_452211; TRINITY_DN43238_c0_g1_i3 718 736 CTGGATCTGTACCAAGCGA BLAST psRNATarget
Ll_transcript_360306; TRINITY_DN47600_c1_g1_i6 3251 3269 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_360296; TRINITY_DN47600_c1_g1_i3 3264 3282 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_360304; TRINITY_DN47600_c1_g1_i5 3652 3670 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_360322; TRINITY_DN47600_c1_g1_i9 4414 4432 CCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_352173; TRINITY_DN43899_c0_g3_i1 652 670 CACGAGCTGCACCAGGCGA BLAST psRNATarget
Ll_transcript_388853; TRINITY_DN50958_c0_g1_i15 1368 1386 CTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_388840; TRINITY_DN50958_c0_g1_i2 1368 1386 CTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_388839; TRINITY_DN50958_c0_g1_i1 1403 1421 CTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_388841; TRINITY_DN50958_c0_g1_i3 1368 1386 CTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_388849; TRINITY_DN50958_c0_g1_i11 1368 1386 CTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_452019; TRINITY_DN40790_c0_g1_i1 107 125 CCTGGTCTGAACCAAGCGG BLAST psRNATarget
Ll_transcript_520537; TRINITY_DN46539_c2_g5_i1 192 210 CTTGACCTGCATTAAGCCA BLAST psRNATarget
Ll_transcript_485798; TRINITY_DN52364_c0_g1_i11 519 537 TCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_485801; TRINITY_DN52364_c0_g1_i13 565 583 TCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_485791; TRINITY_DN52364_c0_g1_i6 580 598 TCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_485794; TRINITY_DN52364_c0_g1_i9 580 598 TCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_485806; TRINITY_DN52364_c0_g1_i18 580 598 TCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_485787; TRINITY_DN52364_c0_g1_i2 580 598 TCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_485793; TRINITY_DN52364_c0_g1_i8 580 598 TCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_289822; TRINITY_DN51319_c3_g1_i1 483 501 TTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_389596; TRINITY_DN37367_c0_g1_i2 928 946 TCCGAGTTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_289824; TRINITY_DN51319_c3_g1_i3 483 501 TTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_389595; TRINITY_DN37367_c0_g1_i1 928 946 TCCGAGTTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_289823; TRINITY_DN51319_c3_g1_i2 666 684 TTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_472864; TRINITY_DN52042_c0_g1_i1 144 162 TCAGCTCTGCACCAAGCGG BLAST psRNATarget

Expression of miRNA 245


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)