miRNA 246 details

Id Micro246
SequenceTCGCTTGGTGCAGGTCGGGA 
Annotated namescme-miR168; 
Annotated pre-miRNANone

Targets of miRNA 246

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_224758; FTRINITY_DN56194_c3_g9_i1 121 140 TCCCGACCTGCACCAAGCGA BLAST psRNATarget
Ll_transcript_108863; FTRINITY_DN50712_c0_g1_i3 727 746 TCTGGATCTGTACCAAGCGA BLAST psRNATarget
Ll_transcript_108860; FTRINITY_DN50712_c0_g1_i1 727 746 TCTGGATCTGTACCAAGCGA BLAST psRNATarget
Ll_transcript_108866; FTRINITY_DN50712_c0_g1_i6 727 746 TCTGGATCTGTACCAAGCGA BLAST psRNATarget
Ll_transcript_108861; FTRINITY_DN50712_c0_g1_i2 727 746 TCTGGATCTGTACCAAGCGA BLAST psRNATarget
Ll_transcript_133026; FTRINITY_DN57565_c2_g2_i1 646 665 TCACGAGCTGCACCAGGCGA BLAST psRNATarget
Ll_transcript_261489; FTRINITY_DN51273_c0_g1_i4 202 221 CCCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_261488; FTRINITY_DN51273_c0_g1_i3 627 646 CCCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_261486; FTRINITY_DN51273_c0_g1_i2 630 649 CCCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_261484; FTRINITY_DN51273_c0_g1_i1 678 697 CCCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_261491; FTRINITY_DN51273_c0_g3_i2 572 591 CCCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_261487; FTRINITY_DN51273_c0_g3_i1 596 615 CCCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_129521; FTRINITY_DN53468_c4_g1_i14 790 809 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129499; FTRINITY_DN53468_c4_g1_i3 1201 1220 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129522; FTRINITY_DN53468_c4_g1_i15 2524 2543 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129505; FTRINITY_DN53468_c4_g1_i6 2750 2769 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129518; FTRINITY_DN53468_c4_g1_i13 2935 2954 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129500; FTRINITY_DN53468_c4_g1_i4 3544 3563 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129501; FTRINITY_DN53468_c4_g1_i5 3674 3693 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129498; FTRINITY_DN53468_c4_g1_i2 3900 3919 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129506; FTRINITY_DN53468_c4_g1_i7 3955 3974 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129497; FTRINITY_DN53468_c4_g1_i1 4085 4104 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129510; FTRINITY_DN53468_c4_g1_i9 4694 4713 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129513; FTRINITY_DN53468_c4_g1_i11 4920 4939 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_129509; FTRINITY_DN53468_c4_g1_i8 5105 5124 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_172982; FTRINITY_DN57036_c0_g1_i10 1656 1675 TCTTGACTTGCACCAGGTGG BLAST psRNATarget
Ll_transcript_172985; FTRINITY_DN57036_c0_g1_i13 1709 1728 TCTTGACTTGCACCAGGTGG BLAST psRNATarget
Ll_transcript_172994; FTRINITY_DN57036_c0_g1_i21 1799 1818 TCTTGACTTGCACCAGGTGG BLAST psRNATarget
Ll_transcript_172990; FTRINITY_DN57036_c0_g1_i18 1852 1871 TCTTGACTTGCACCAGGTGG BLAST psRNATarget
Ll_transcript_172983; FTRINITY_DN57036_c0_g1_i11 1921 1940 TCTTGACTTGCACCAGGTGG BLAST psRNATarget
Ll_transcript_135351; FTRINITY_DN58024_c0_g1_i4 1434 1453 ACTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_135357; FTRINITY_DN58024_c0_g1_i8 1434 1453 ACTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_135366; FTRINITY_DN58024_c0_g1_i16 1434 1453 ACTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_135349; FTRINITY_DN58024_c0_g1_i2 1434 1453 ACTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_135365; FTRINITY_DN58024_c0_g1_i15 1434 1453 ACTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_205114; FTRINITY_DN56951_c2_g2_i9 502 521 GTCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_205113; FTRINITY_DN56951_c2_g2_i8 502 521 GTCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_205111; FTRINITY_DN56951_c2_g2_i6 502 521 GTCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_21930; FTRINITY_DN55132_c1_g3_i8 649 668 CTTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_21897; FTRINITY_DN55132_c1_g3_i4 520 539 CTTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_21911; FTRINITY_DN55132_c1_g3_i7 1105 1124 CTTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_40261; FTRINITY_DN47198_c0_g1_i2 929 948 ATCCGAGTTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_21889; FTRINITY_DN55132_c1_g3_i2 976 995 CTTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_40260; FTRINITY_DN47198_c0_g1_i1 929 948 ATCCGAGTTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_21902; FTRINITY_DN55132_c1_g3_i5 649 668 CTTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_21894; FTRINITY_DN55132_c1_g3_i3 649 668 CTTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_21887; FTRINITY_DN55132_c1_g3_i1 1105 1124 CTTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_21908; FTRINITY_DN55132_c1_g3_i6 1105 1124 CTTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_452213; TRINITY_DN43238_c0_g1_i5 717 736 TCTGGATCTGTACCAAGCGA BLAST psRNATarget
Ll_transcript_452210; TRINITY_DN43238_c0_g1_i2 717 736 TCTGGATCTGTACCAAGCGA BLAST psRNATarget
Ll_transcript_452211; TRINITY_DN43238_c0_g1_i3 717 736 TCTGGATCTGTACCAAGCGA BLAST psRNATarget
Ll_transcript_352173; TRINITY_DN43899_c0_g3_i1 651 670 TCACGAGCTGCACCAGGCGA BLAST psRNATarget
Ll_transcript_317376; TRINITY_DN44834_c0_g2_i1 671 690 CCCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_317377; TRINITY_DN44834_c0_g1_i2 547 566 CCCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_317375; TRINITY_DN44834_c0_g1_i1 578 597 CCCCGAGCTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_360323; TRINITY_DN47600_c1_g1_i10 2488 2507 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_360307; TRINITY_DN47600_c1_g1_i7 2501 2520 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_360306; TRINITY_DN47600_c1_g1_i6 3250 3269 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_360296; TRINITY_DN47600_c1_g1_i3 3263 3282 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_360304; TRINITY_DN47600_c1_g1_i5 3651 3670 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_360322; TRINITY_DN47600_c1_g1_i9 4413 4432 ACCAGATTTGCACCAAGTGA BLAST psRNATarget
Ll_transcript_388853; TRINITY_DN50958_c0_g1_i15 1367 1386 ACTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_388840; TRINITY_DN50958_c0_g1_i2 1367 1386 ACTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_388839; TRINITY_DN50958_c0_g1_i1 1402 1421 ACTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_388841; TRINITY_DN50958_c0_g1_i3 1367 1386 ACTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_388849; TRINITY_DN50958_c0_g1_i11 1367 1386 ACTCGATCTGCGTCAGGTGA BLAST psRNATarget
Ll_transcript_452019; TRINITY_DN40790_c0_g1_i1 106 125 CCCTGGTCTGAACCAAGCGG BLAST psRNATarget
Ll_transcript_520537; TRINITY_DN46539_c2_g5_i1 191 210 GCTTGACCTGCATTAAGCCA BLAST psRNATarget
Ll_transcript_485798; TRINITY_DN52364_c0_g1_i11 518 537 GTCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_485801; TRINITY_DN52364_c0_g1_i13 564 583 GTCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_485791; TRINITY_DN52364_c0_g1_i6 579 598 GTCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_485794; TRINITY_DN52364_c0_g1_i9 579 598 GTCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_485806; TRINITY_DN52364_c0_g1_i18 579 598 GTCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_485787; TRINITY_DN52364_c0_g1_i2 579 598 GTCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_485793; TRINITY_DN52364_c0_g1_i8 579 598 GTCTGATCTGCACCAAGTCA BLAST psRNATarget
Ll_transcript_289822; TRINITY_DN51319_c3_g1_i1 482 501 CTTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_389596; TRINITY_DN37367_c0_g1_i2 927 946 ATCCGAGTTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_289824; TRINITY_DN51319_c3_g1_i3 482 501 CTTCCACCTGCACCCAGCGA BLAST psRNATarget
Ll_transcript_389595; TRINITY_DN37367_c0_g1_i1 927 946 ATCCGAGTTGCACCAAGCAA BLAST psRNATarget
Ll_transcript_289823; TRINITY_DN51319_c3_g1_i2 665 684 CTTCCACCTGCACCCAGCGA BLAST psRNATarget

Expression of miRNA 246


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)