Transcript | Ll_transcript_32835 |
---|---|
CDS coordinates | 1480-8295 (+) |
Peptide sequence | MSRLKPWLLLHGSKKKKVVLREEAPAVVKPQSTESKPIMWTCNVSAPEMTMMLFNLAGTQVYHGCLQSSHVFANNVSNMGTTVHVEVGELNLRSADEYQESLKESVFGVESNSASIIHIKKVSLDWGKKDVKSSPEDGPRCMLGLSIDVTGMGVYLTFKRVESFISTVIPFQALLKKLSASKKKSTQSQGRLSKTSGKGTKILKCNLELCSVYVLGETGLENTDVADPKRVNYGSQGGRVIIDLSADGTPRTASIVSTVSNEYQKLKYSISLELCHFKLCVNKEKQSTQMELERARSVYQEYMEESRPVTKVDLFDIQNAKFVQRSGGRGENAACSLFSSTDINVRWEPDVHLSLIELVLQLKLAVHSKKLEECGNEQMGDLSNMRDANRKNEATVESGHLEKKKKKASIFAIDVEMLTLSAELGDGVDAMVQVQSIFSENASIGLLFEGLTFSFNGARIFKSSRMQISRIPSKSTCASDAKGPVATTWDWVIQGLNVHICLPYRLELRAIDDALEDMLRALKLIIAAKTNLIFPVKKETSKVKKPSSVKFGCVKFFIRKLAFDIEEEPIQGWLDEHYQLLKKEAGELVVRLNFLDEFISKANQGTKSTDDTNNSSQERKVIFNDVEVDISNSSTIESMREEIYRRSFRSYYQACQNLVLCEGSGACKDGFQAGFKPSASRSSVLSVYALDLDVTLTKIDGGDDGMIEVIKKLDPVCLENDIPFSRLYGSNILLNTSSLVIQLRDYTFPLLSASSGKCEGRIVLAQQATSFQPQMRQDVYVGRWRKVDMLRSASGTTPPMKTYSDLPLHFQKGEVSFGVGYEPVFADISYAFTVVLRRANLSVKKPGLLILPPKNERSLPWWDDMRNYIHGKISLLFSETRWYILASTDPYEQLDKLQITSSSMEIHQSDGRVILSSKDFKIFLSSLESMANKCGSKIPTGFSSAFLEVPEFTVDVTMDWDSDSGNPLNHFLFALPIEGKPREKIFDPFRSTSLSLRWNISLSSFLPSFEKQSPSFIARDSIEGDATAQHSTRISHDVSSASPTVKLGAHDLAWIVKFSTLNYLPPHKLRFFSRWPRFGVPRIVRSGNLSLDKVMTEFMIRIDSTPTCIKNMPLHDDDPAKGLTFMMAKLKFELCFGRGKQKFTFESKRDLLDLVYLGIDLHTPKVFLNKEDCTSVAKLVGMTPKLSQPVSEDKIIPEKGSITQKSRDDGFLLSCDYFTIRRQSPKADPATLLAWQEAGRRNVEMTCARSEFGNKSEADENMQSDPSDDDGYNVVIADNCQRVFVYGLKLLWSIENRDGICSWILGLSKAAAPPKPSPSRQYAQRKLVEENKQHDGVETHQDDATEVTQDDGAETHQDDKAETHEDDGAKTHQDGGAEINQDGGAEINQDSGPEIHQDDVSKRPLTGNSSDSPPSQPVGTSGSFSSPPCLVKADNSPPDKNDNTDDLMEGTRHFMVNVIEPQFNLHSEDANGRFLLAAASGRALAQSFHSVLRVGYEMIEQAVGTKDVHSGGYEPEIAWKRMELSVMLEHVQAHVAPTDVDPGAGVQWLPKIRRGSPKVMRTGALLERVFMPCDMYFRYTRHKGGTPELKVKPLKELTFNSHNITATMTSRQFQVMLDVLSNLLFARLPKARKNSLSLSVEDEEVEEEADEVVPDGVEEVEIAKINLEKKERNQKLILNDIIKLSLRNDTSGDIFPEKEDDLWMIFGGRALLVQGLKRELVSAKISKKEAYAALRVEMHKAAQQRLMEKEKNKSPSYAMRISLQINKVVWSMLLDGKSFAEAEINDMIYDFDRDYKDVGISQFTTKYLVFKNCLPNAKSDTILSAWNPPPEWGKKVMLRVDARQGAPKDGSSPFELFQVDIYPLKIYLTETMYRMMWGYFFPGEERDSQRRQEVWKVSTTAGARRVKKGSSVHEASASSSHSKKESEASSKSSFTSMLFPSSSQPSVPADSARASKAQNTKPNPGTGSTSELRRTSSFDRTWEETVAESVADELVLQSVPFDSIEKQDEASKTKSKDSKGVKAGGSTHEEKKVAKSQEEKRSRPQKMMEFHDIKISQVELLVTYEGQRFVVNDLKLLMDQFHRVEFTGTWRRLFSRVKKHIIWGVLKSVTGMQIKKFKDKGQSQPTGASGPEIDHNIDNESQAAKSNQHPPTWPKRPNDGAGDGFVTSVRGVFHTQRRKAKAFVLRTMRGEEENDFQGDLSENDVEISPFARQLTIMKAKKLIKRHTKKFHNKGKKDSPLQQSEPLPLSPEDITFDSDSSSGSSSYDGLDE* |
ORF Type | complete |
Blastp | Protein SABRE from Arabidopsis with 62.42% of identity |
---|---|
Blastx | Protein SABRE from Arabidopsis with 62.36% of identity |
Eggnog | UPF0378 protein(ENOG410XSYR) |
Kegg | Link to kegg annotations (AT1G58250) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460714.1) |
Pfam | RNA pol II promoter Fmp27 protein domain (PF10347.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer