Protein coding transcript 249507

TranscriptLl_transcript_30165
CDS coordinates290-5551 (+)
Peptide sequenceMDIRFPFSPAEVAKVRRVQFGILSPDEIRQMSVVQIEHGETTERGKPKIGGLSDPRLGTIDRKMKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLNIMRCVCFNCSKILADENDHKFKQALRTRNPKSRLKKILDACKNKSKCEGGDEIDIAGGQDTEEAVKKSRGGCGAQQPRISIDGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLAVLKRISDEDCQLLGLDPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQERNGSPAHIISEFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDSLLGCRKITKRDTFIPKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKAINLIRYSSWHNESERGSITPGDTVVRIEKGEVLTGTLCKKTLGASSGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEVINQTISQAKEKVKQLIREAQEKKLEAEPGRTMMDSFENRVNQTLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMCKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQKLDSLKMKKVEFDRVFKYEFDDENWKPSYMLEEPVEDLKTIREFRSVFEAEFQKLEADRFQLATEIATTGDNSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVPGDDALSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFHWVVGEIESRFLQSQVASGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVFLKPEVGKTKERAKIVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDEEVALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFEDDLTCIFNDDNAEKLILRIRIMNDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNTKVQKFDKNEGFKPHEEWMLDTEGVNLLAVMCHEDVDATRSTSNHLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQLAPIGTGECALYLNDDMLKNAIELQLPSYMDGLDFGMTPARSPISGTPYHEGLMSPSYLLSPNLRLSPTTDAQFSPYVGGMAFSPASSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYNQQSARYSPSLAYSPSSPRLSPSSPYSPTSPNYR*
ORF Typecomplete

Annotations of Ll_transcript_30165

BlastpDNA-directed RNA polymerase II subunit 1 from Arabidopsis with 81.32% of identity
BlastxDNA-directed RNA polymerase II subunit 1 from Arabidopsis with 86.98% of identity
EggnogDNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
KeggLink to kegg annotations (AT4G35800)
CantataDBLink to cantataDB annotations (CNT0002743)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421112.1)
PfamRNA polymerase Rpb1, domain 1 (PF04997.11)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;


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Alignmet by MSA Viewer