Transcript | Ll_transcript_32690 |
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CDS coordinates | 253-6432 (+) |
Peptide sequence | MKLKRKRTLEVRTVGKYSIRDTSLNSKLFAFAQGFGGKEEGLGLIASAAPNACDPLAYELGYTLHFEFYAANKSECDIKVSEPLVQGLQIIHLCDINKCVETDLELLRKLVTEYKLPAGLRFSLLTRLRFTRAFGSLASRQQYTCIRLYAFTVFIQACSDANDLVSFLNAEPGFINELVSLLSYEDAVMEKIRILCLHSLAALCQDRSHQTSVLTGVTSGGHRGILSSLMQKAIDSVVSGDTSRWSVHFAEALLSLVTVLVSSSSSGCSAMREAGFIPTLLPLLKDINPQHLHLVEKAVRILEAFMDYSNQAAALFRDLGGLDDTISRLKIEVSHVETGGKQPDENSESSARSAHMKEGSSTSQDDMQPLYSEPLIAYHRRLLMKALLRAISLGTYAPGNTTRIYGSEENVLPHCLCIIFRRANEFGGGIFSLAATVMSDLIQKDPTCFPVLDTAGLPSAFLDAIMDDVLNSAEAITCIPQCLDALCLNSNGLQAVKDKNSLRCFVKVFTSRTYLRALTGDTPASLSSGLDELMRHASSLRGPGVDMLVEILETISKIGSGIDLSSSCSDPCSSTSVPMEMDGENKNLMLPDNRESSKTDNTKQITEPSPDASIMNIESFLPDCVNNVARLLETILQNADTCRIFVEKKGIEAVLQLFTLPLMPPFAFLGQNIFAAFKNFSPQHNVSLARTVCSFLREHLKSTNELLDSVGGTQLAVVESAKQTKVLKYLSSLEGLLTLSASLLKGTATTVVSELSTSDADVLKDLGRTYKEIMWQISLCNDSKAEEKNTDQEPGISQVPPSAAVERENDDDANVQTVRYTNPVFARHGSHSLWSGERDFVSVVRSGESLHRRNRHGLSRLRGGRTGRHVEALNIDSEAASSLVEAPSSQNLKKKSPDVLASEILNKLASTLRSFFTALVKGFTSPNRRRADPGPLSSASKILGTALATNFLEALSFSGHFTYAELEMSLSVKCRYLGKVVDDMAALTFDSRRRSCYTVMVNNFYVHGTFKELLTTFEATSQLLWTLPCSFPSSDIDIGKKGDGSKLSHNIWLLDTLQSYCRLLTYFVNSSILLSATSASQAELLAQPVAVGLSIGLFPVPRDPDAFVKMLQSQVLDVILPVWNHPMFSNCSPGFISSIISLVTHVYSGVGDVKRNHSNIVGITNQRFMPPPPDETTIGTIVEMGFSRARAEEALRRVETNSVEMAMEWLFSHADDPVQEDDELARALALSLGNSSETSKVDGAEKTIGVLTEEGHVKKPPIDDILAASVKLFQGSDSVAFQLTDLLVTLCSQNKGEDRPKIISYLLQQLKLCPLDFSKDNCALSVLAHIIALLLFEDGTTREIAAENGIISTAIDILTDFKGKHESGKELLAPKCISVLLLILDQMLQSRPKTENTDGTQTGSVPESSGDHGSLQFAGVIVQKEKKLDVNVKEPGAALDNILGSSTGFASIDESLKLLNIVCDLIKQHVPAVVMQAVLQLCARLTKTHALALQFLENGGLTALFSLPKNCFFPGYDTVVSAIVRHLLEDPQTLQTAMELEIRQTLSGNRHSGRVSPRSFLTSLAPVISRDPVVFMKAATTVCQLETSGGRTIVVLSKEKEKEKSKASSTEAGLSSNECVRIPESKSHDGSAKCLKSHKKVPVNLTQVIDQLLEIVLKYPPMNGQEDSECGSTFMDIDEPAMKVKGKSKVEEVGVLETESERSTGLVKVTFVLKLLSDILLMYGHAVGVILRRDSEMGQFRGSNQPSGHSGIIHHVLHRLLPLSVDKSAGPDDWRSKLSDKASWFLVVLCGRSSEGRKRVTNELVKVLMSFSNLESNSTKNSLLPDKRLFTFIDLVYSILSKNSSAGSLPGSGYSPDIAKSMIDGGIIQCLTSILQVVDLDHPDAPKIVNLILKGLEGLTRAANASEHIIKSDGIEKRRSAGSNDRPDDQIRTSSAAETVRDDQNASSQEAHGYTMDNAHDQGTSQGNHHTDNPNQTVQGMRVEGETQNPSMELGVDFMPEEIGEGAVLHNPDQIEMTFHVENRADDDMGDEDDDMGDDGDDDEDDEDGEDEEEDIAEDG |
ORF Type | 3prime_partial |
Blastp | E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 61.4% of identity |
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Blastx | E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 61.16% of identity |
Eggnog | ubiquitin protein ligase(COG5021) |
Kegg | Link to kegg annotations (AT1G55860) |
CantataDB | Link to cantataDB annotations (CNT0000539) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448017.1) |
Pfam | Domain of Unknown Function (DUF908) (PF06012.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |
Grab and slide to change sequence position
Alignmet by MSA Viewer