Protein coding transcript 249730

TranscriptLl_transcript_32681
CDS coordinates872-6487 (+)
Peptide sequenceMEKIRILCLHSLAALCQDRSHQTSVLTGVTSGGHRGILSSLMQKAIDSVVSGDTSRWSVHFAEALLSLVTVLVSSSSSGCSAMREAGFIPTLLPLLKDINPQHLHLVEKAVRILEAFMDYSNQAAALFRDLGGLDDTISRLKIEVSHVETGGKQPDENSESSARSAHMKEGSSTSQDDMQPLYSEPLIAYHRRLLMKALLRAISLGTYAPGNTTRIYGSEENVLPHCLCIIFRRANEFGGGIFSLAATVMSDLIQKDPTCFPVLDTAGLPSAFLDAIMDDVLNSAEAITCIPQCLDALCLNSNGLQAVKDKNSLRCFVKVFTSRTYLRALTGDTPASLSSGLDELMRHASSLRGPGVDMLVEILETISKIGSGIDLSSSCSDPCSSTSVPMEMDGENKNLMLPDNRESSKTDNTKQITEPSPDASIMNIESFLPDCVNNVARLLETILQNADTCRIFVEKKGIEAVLQLFTLPLMPPFAFLGQNIFAAFKNFSPQHNVSLARTVCSFLREHLKSTNELLDSVGGTQLAVVESAKQTKVLKYLSSLEGLLTLSASLLKGTATTVVSELSTSDADVLKDLGRTYKEIMWQISLCNDSKAEEKNTDQEPGISQVPPSAAVERENDDDANVQTVRYTNPVFARHGSHSLWSGERDFVSVVRSGESLHRRNRHGLSRLRGGRTGRHVEALNIDSEAASSLVEAPSSQNLKKKSPDVLASEILNKLASTLRSFFTALVKGFTSPNRRRADPGPLSSASKILGTALATNFLEALSFSGHFTYAELEMSLSVKCRYLGKVVDDMAALTFDSRRRSCYTVMVNNFYVHGTFKELLTTFEATSQLLWTLPCSFPSSDIDIGKKGDGSKLSHNIWLLDTLQSYCRLLTYFVNSSILLSATSASQAELLAQPVAVGLSIGLFPVPRDPDAFVKMLQSQVLDVILPVWNHPMFSNCSPGFISSIISLVTHVYSGVGDVKRNHSNIVGITNQRFMPPPPDETTIGTIVEMGFSRARAEEALRRVETNSVEMAMEWLFSHADDPVQEDDELARALALSLGNSSETSKVDGAEKTIGVLTEEGHVKKPPIDDILAASVKLFQGSDSVAFQLTDLLVTLCSQNKGEDRPKIISYLLQQLKLCPLDFSKDNCALSVLAHIIALLLFEDGTTREIAAENGIISTAIDILTDFKGKHESGKELLAPKCISVLLLILDQMLQSRPKTENTDGTQTGSVPESSGDHGSLQFAGVIVQKEKKLDVNVKEPGAALDNILGSSTGFASIDESLKLLNIVCDLIKQHVPAVVMQAVLQLCARLTKTHALALQFLENGGLTALFSLPKNCFFPGYDTVVSAIVRHLLEDPQTLQTAMELEIRQTLSGNRHSGRVSPRSFLTSLAPVISRDPVVFMKAATTVCQLETSGGRTIVVLSKEKEKEKSKASSTEAGLSSNECVRIPESKSHDGSAKCLKSHKKVPVNLTQVIDQLLEIVLKYPPMNGQEDSECGSTFMDIDEPAMKVKGKSKVEEVGVLETESERSTGLVKVTFVLKLLSDILLMYGHAVGVILRRDSEMGQFRGSNQPSGHSGIIHHVLHRLLPLSVDKSAGPDDWRSKLSDKASWFLVVLCGRSSEGRKRVTNELVKVLMSFSNLESNSTKNSLLPDKRLFTFIDLVYSILSKNSSAGSLPGSGYSPDIAKSMIDGGIIQCLTSILQVVDLDHPDAPKIVNLILKGLEGLTRAANASEHIIKSDGIEKRRSAGSNDRPDDQIRTSSAAETVRDDQNASSQEAHGYTMDNAHDQGTSQGNHHTDNPNQTVQGMRVEGETQNPSMELGVDFMPEEIGEGAVLHNPDQIEMTFHVENRADDDMGDEDDDMGDDGDDDEDDEDGEDEEEDIAEDG
ORF Type3prime_partial

Annotations of Ll_transcript_32681

BlastpE3 ubiquitin-protein ligase UPL1 from Arabidopsis with 61.53% of identity
BlastxE3 ubiquitin-protein ligase UPL1 from Arabidopsis with 61.16% of identity
Eggnogubiquitin protein ligase(COG5021)
KeggLink to kegg annotations (AT1G55860)
CantataDBLink to cantataDB annotations (CNT0000539)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019448017.1)
PfamDomain of Unknown Function (DUF913) (PF06025.11)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;


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Alignmet by MSA Viewer