Transcript | Ll_transcript_7693 |
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CDS coordinates | 175-1836 (+) |
Peptide sequence | MSSCLLPDTFTFRYALLPSATSSIKSRDFIAFQPHCVLSTTPSPTALTLEKLALSSSSSSSSSSSPYLPSSTQENFKATLSTQSLLTSEENVIAAAASEAVALAKAALKVAKVAALLVKNKSPPEAAYTPPHDSSKSDNLILLKWVQHLEAQEDGVVSDSEEHVYNDIKEESDDTEPTYEELERLNQQLSDSIAVRSTRQTERKAKRVRAAEKSATHMVSFKSGSTSRKKRVPTQEVDYSDPLRYLRATTSTSRLLTPSEEIELSEGIQDLLKLEKLQEDLTERCGSQPTFAQWAAVAGVDQKTLRKRLNYGMFCKDKMIKSNIRLVISIAKGYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDDEEVAEATGLSMKRLSAVLLTPKAPRSLEQKIGIDQNLKPSEVIADPEAETAEEQLIKQFMKKDLEKVLDSLNPREKQVIRWRFGMDDGRMKTLQEIGESMGVSRERVRQIESCAFRKLKNKKRTKHLQQYLIS* |
ORF Type | complete |
Blastp | RNA polymerase sigma factor sigB from Arabidopsis with 62.37% of identity |
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Blastx | RNA polymerase sigma factor sigB from Arabidopsis with 74.14% of identity |
Eggnog | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (By similarity)(COG0568) |
Kegg | Link to kegg annotations (AT1G08540) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414778.1) |
Pfam | Sigma-70 factor, region 1.2 (PF00140.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |
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Alignmet by MSA Viewer